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scnpilot_solids2_trim150_scaffold_2164

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2164_1
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..3790
DNA (3789bp) protein (1263aa)
DNA methylase n=1 Tax=Empedobacter brevis RepID=UPI00037BA93E
DNA methylase {ECO:0000313|EMBL:KEQ31131.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
N-6 DNA methylase
scnpilot_solids2_trim150_scaffold_2164_2
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3793..4617)
DNA (825bp) protein (275aa)
RteC protein n=2 Tax=Bacteroidetes RepID=D7VT63_9SPHI
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:KEQ31130.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
Tetracycline regulation of excision, RteC rbh
scnpilot_solids2_trim150_scaffold_2164_3
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4888..5319)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MJW9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KEQ31129.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2164_4
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5325..6422)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2JA46_9SPHI rbh
RND transporter {ECO:0000313|EMBL:KEQ31128.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
RND family efflux transporter, MFP subunit rbh
scnpilot_solids2_trim150_scaffold_2164_5
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6427..9585)
DNA (3159bp) protein (1053aa)
Acriflavin resistance protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HVH5_9SPHI rbh
Acriflavin resistance protein {ECO:0000313|EMBL:KEQ31127.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
cation/multidrug efflux pump rbh
scnpilot_solids2_trim150_scaffold_2164_6
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9605..10987)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HCP8_9SPHI rbh
Transporter {ECO:0000313|EMBL:KEQ31126.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
outer membrane protein rbh
scnpilot_solids2_trim150_scaffold_2164_7
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11007..11441)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSS1_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KEQ31125.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2164_8
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11486..12118)
DNA (633bp) protein (211aa)
Inner membrane protein YkgB n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JDC8_9BACT rbh
Membrane protein {ECO:0000313|EMBL:KEQ31124.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_2164_9
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12118..13038)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12700 RepID=S3Y7G0_9FLAO rbh
Membrane protein {ECO:0000313|EMBL:KEQ31123.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2164_10
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13126..14334)
DNA (1209bp) protein (403aa)
Copper-resistance protein, CopA family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXF8_9SPHI
Copper-resistance protein, CopA family {ECO:0000313|EMBL:EEI92399.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
multicopper oxidase type 3
scnpilot_solids2_trim150_scaffold_2164_11
unknown

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comp(14355..14492)
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 11 items

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