ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids2_trim150_scaffold_2164_8

Organism: SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_39_37

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(11486..12118)

Top 3 Functional Annotations

Value Algorithm Source
Inner membrane protein YkgB n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JDC8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 196.0
  • Bit_score: 318
  • Evalue 5.80e-84
  • rbh
Membrane protein {ECO:0000313|EMBL:KEQ31124.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 210.0
  • Bit_score: 420
  • Evalue 2.00e-114
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 200.0
  • Bit_score: 316
  • Evalue 6.90e-84
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 633
ATGAATATATTGATCAATATTTTAGCAAATAGCCAGCAATCTTTTATCAATCTGACTAGAATATCTATTTTCATCGTAATGGTCTGGATTGGCGGATTGAAAGCTTATCAATATGAAGCTGATGGTATCGTACCATTTGTTATCAACAGCCCTTTTATGAGTTTCTTCTACAATAATGCAGATAAAACCGTTATAGATAAAACGGGAAAACAAGTAGCAGAACATACGCTGTATAAAAATCCCGAAGGAAAAACTGTACAGAAAAATGTAGATTGGCATACCGGTAATGGCACATACTTATTTTCATACGGCTTAGGAACGGTCATTGTTTTGATAGGATTGGCGGTAATACTCGGAATTTGGTTCCCAAAAATAGGTCTAATAGGTGGCCTGTTGACATTCATAATGTCTATTGTTACCTTATCGTTCCTGATTACCACGCCTGAAGTGTATGTCCCCAATCTAGGTGGAGATTTTCCGACCCCGCAATATGGGTTTCCATATCTATCAGGTGCAGGGAGGTTGGTGATAAAAGATATTATCATGTTGGGAGCTGCGCTAATTGTTGCTTCTGATAGTGCAAAAAGAATACTTCAAAGAACCCCAAAATCTTACAATAAATTACCTAAATAA
PROTEIN sequence
Length: 211
MNILINILANSQQSFINLTRISIFIVMVWIGGLKAYQYEADGIVPFVINSPFMSFFYNNADKTVIDKTGKQVAEHTLYKNPEGKTVQKNVDWHTGNGTYLFSYGLGTVIVLIGLAVILGIWFPKIGLIGGLLTFIMSIVTLSFLITTPEVYVPNLGGDFPTPQYGFPYLSGAGRLVIKDIIMLGAALIVASDSAKRILQRTPKSYNKLPK*