ggKbase home page

scnpilot_solids2_trim150_scaffold_149

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_149_1
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

740..1174
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5EEK3_NOCAS
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62878.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
scnpilot_solids2_trim150_scaffold_149_2
Rickettsia felis, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1234..1542
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) RepID=Q4UKY7_RICFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAY61786.1}; TaxID=315456 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group.;" source="Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (Rickettsia azadi).;"
scnpilot_solids2_trim150_scaffold_149_3
unknown

Not on your lists

1607..1870
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_149_4
Arthrobacter keyseri, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2058..2861)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Arthrobacter keyseri RepID=Q9AGM1_9MICC
Uncharacterized protein {ECO:0000313|EMBL:AAK16541.1}; TaxID=122866 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter keyseri.;"
filamentation induced by cAMP protein Fic
scnpilot_solids2_trim150_scaffold_149_5
unknown

Not on your lists

comp(3480..3932)
DNA (453bp) protein (151aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_149_6
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4092..4295)
DNA (204bp) protein (68aa)
Putative Xre family DNA binding protein n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GRG4_9ACTO
Putative Xre family DNA binding protein {ECO:0000313|EMBL:GAB06189.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
scnpilot_solids2_trim150_scaffold_149_7
Brachybacterium faecium, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4502..5824
DNA (1323bp) protein (441aa)
Glycosyl/glycerophosphate transferase, teichoic acid biosynthesis n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MGW5_BRAFD rbh
glycosyl/glycerophosphate transferase, teichoic acid biosynthesis rbh
Glycosyl/glycerophosphate transferase, teichoic acid biosynthesis {ECO:0000313|EMBL:ACU86413.1}; TaxID=446465 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860).;"
scnpilot_solids2_trim150_scaffold_149_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5911..6618
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00037B524C
Uncharacterized protein {ECO:0000313|EMBL:ERK70887.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative sugar nucleotidyltransferase
scnpilot_solids2_trim150_scaffold_149_9
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6623..7483
DNA (861bp) protein (287aa)
ABC-2 type transporter n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C1L2_BEUC1
ABC transporter; K09690 lipopolysaccharide transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
scnpilot_solids2_trim150_scaffold_149_10
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7483..8244
DNA (762bp) protein (254aa)
ABC transporter related n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C1L3_BEUC1 rbh
ABC transporter; K09691 lipopolysaccharide transport system ATP-binding protein rbh
ABC transporter related {ECO:0000313|EMBL:ACQ79481.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
scnpilot_solids2_trim150_scaffold_149_11
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8237..11164
DNA (2928bp) protein (976aa)
Uncharacterized protein n=2 Tax=Bacillus cereus RepID=J8FIW9_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJR00586.1}; TaxID=1053219 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus MC67.;"
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
scnpilot_solids2_trim150_scaffold_149_12
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11157..12320
DNA (1164bp) protein (388aa)
UDP-glucose:polyglycerol phosphate glucosyltransferase n=1 Tax=Bacillus mojavensis RepID=UPI0002899881
Uncharacterized protein {ECO:0000313|EMBL:ETK37472.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
putative glycosyl transferase, group 1
scnpilot_solids2_trim150_scaffold_149_13
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12356..13759)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B4CDED
Uncharacterized protein {ECO:0000313|EMBL:EST38970.1}; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_149_14
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13997..16075
DNA (2079bp) protein (693aa)
Acyltransferase 3 n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UXX1_9MICC rbh
Acyltransferase 3 {ECO:0000313|EMBL:EMY35236.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
acyltransferase 3 rbh
scnpilot_solids2_trim150_scaffold_149_15
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16089..17339)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00036AF1E9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL18146.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
putative CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
scnpilot_solids2_trim150_scaffold_149_16
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17666..21322
DNA (3657bp) protein (1219aa)
Glycosyltransferase n=1 Tax=Streptomyces fungicidicus RepID=Q06Z23_9ACTO rbh
Glycerophosphotransferase {ECO:0000313|EMBL:KES03258.1}; TaxID=55952 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase rbh
scnpilot_solids2_trim150_scaffold_149_17
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21319..22272
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WDQ3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ46150.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
scnpilot_solids2_trim150_scaffold_149_18
unknown

Not on your lists

22428..23171
DNA (744bp) protein (248aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_149_19
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23258..24022)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000368A34D
inositol monophosphatase
Inositol monophosphatase {ECO:0000313|EMBL:CCH85943.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
scnpilot_solids2_trim150_scaffold_149_20
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24160..25071
DNA (912bp) protein (304aa)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732, ECO:0000313|EMBL:AIY18861.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4); K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] rbh
Sulfate adenylyltransferase subunit 2 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPG9_NOCSJ rbh
scnpilot_solids2_trim150_scaffold_149_21
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25075..26316
DNA (1242bp) protein (414aa)
sulfate adenylyltransferase subunit 1 (EC:2.7.7.4); K00956 sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] rbh
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Sulfate adenylyltransferase, large subunit/adenylylsulfate kinase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UXG4_9ACTO rbh
scnpilot_solids2_trim150_scaffold_149_22
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26491..27411)
DNA (921bp) protein (307aa)
membrane protein n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B60C65 rbh
Membrane protein {ECO:0000313|EMBL:KHL18873.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
permease; K07090 rbh
scnpilot_solids2_trim150_scaffold_149_23
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27411..28649)
DNA (1239bp) protein (413aa)
adenylylsulfate kinase (EC:2.7.1.25); K00958 sulfate adenylyltransferase [EC:2.7.7.4] rbh
Adenylylsulfate kinase {ECO:0000313|EMBL:ABL83702.1}; EC=2.7.1.25 {ECO:0000313|EMBL:ABL83702.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Adenylylsulfate kinase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPG7_NOCSJ rbh
scnpilot_solids2_trim150_scaffold_149_24
Streptomyces sp. e14, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28831..29691
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. e14 RepID=D6K850_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFF92157.2}; TaxID=645465 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. e14.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_149_25
Brachybacterium faecium, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29744..31075
DNA (1332bp) protein (444aa)
Glycosyl/glycerophosphate transferase, teichoic acid biosynthesis n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MGW5_BRAFD
glycosyl/glycerophosphate transferase, teichoic acid biosynthesis
Glycosyl/glycerophosphate transferase, teichoic acid biosynthesis {ECO:0000313|EMBL:ACU86413.1}; TaxID=446465 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860).;"
scnpilot_solids2_trim150_scaffold_149_26
Actinomyces massiliensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31151..33202)
DNA (2052bp) protein (684aa)
PF02720 domain protein n=1 Tax=Actinomyces massiliensis F0489 RepID=J1HMV5_9ACTO
PF02720 domain protein {ECO:0000313|EMBL:EJF46928.1}; TaxID=1125718 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces massiliensis F0489.;"
HNH endonuclease
scnpilot_solids2_trim150_scaffold_149_27
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33411..34820)
DNA (1410bp) protein (470aa)
rmlC; dTDP-4-dehydrorhamnose reductase / dTDP-4-dehydrorhamnose 3,5-epimerase (EC:1.1.1.133 5.1.3.13); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Putative dTDP-4-dehydrorhamnose reductase n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2S8S6_9ACTO
Putative dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EFQ84581.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
scnpilot_solids2_trim150_scaffold_149_28
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34839..35837)
DNA (999bp) protein (333aa)
rfbB; dTDP-D-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Agromyces subbeticus RepID=UPI0003B450DC
scnpilot_solids2_trim150_scaffold_149_29
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35834..36709)
DNA (876bp) protein (292aa)
glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
glucose-1-phosphate thymidylyltransferase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0003086283 rbh
scnpilot_solids2_trim150_scaffold_149_30
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37090..39279
DNA (2190bp) protein (730aa)
Acyltransferase 3 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11L36_MESSB rbh
acyltransferase 3 rbh
Acyltransferase 3 {ECO:0000313|EMBL:ABG61889.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Displaying items 1-30 of 75 in total

View Taxonomy