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scnpilot_solids2_trim150_scaffold_227

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_227_1
unknown

Not on your lists

comp(2..106)
DNA (105bp) protein (35aa)
glucose-6-phosphate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F4983
scnpilot_solids2_trim150_scaffold_227_2
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(208..741)
DNA (534bp) protein (178aa)
Putative iron-sulfur binding protein n=3 Tax=Bordetella RepID=K0MD15_BORPB
iron-sulfur binding protein
Putative iron-sulfur binding protein {ECO:0000313|EMBL:CCN21067.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
scnpilot_solids2_trim150_scaffold_227_3
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(738..1607)
DNA (870bp) protein (290aa)
molybdopterin dehydrogenase FAD-binding; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
hypothetical protein n=1 Tax=Streptomyces sulphureus RepID=UPI000372B0FA
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:EKF20903.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
scnpilot_solids2_trim150_scaffold_227_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1604..4024)
DNA (2421bp) protein (807aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037BA4B4 rbh
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KJZ49686.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
oxidoreductase large subunit rbh
scnpilot_solids2_trim150_scaffold_227_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4099..4452)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037EEBD3
hypothetical protein
ChrR Cupin-like domain {ECO:0000313|EMBL:CDM65166.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
scnpilot_solids2_trim150_scaffold_227_6
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4500..5183)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000376FD5F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AET92440.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
scnpilot_solids2_trim150_scaffold_227_7
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5180..5968)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003670F94 rbh
Apolipoprotein N-acyltransferase {ECO:0000313|EMBL:KDN84107.1}; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
hydrolase
scnpilot_solids2_trim150_scaffold_227_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5965..7008)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037068F5 rbh
luciferase-like protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
scnpilot_solids2_trim150_scaffold_227_9
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7062..8402)
DNA (1341bp) protein (447aa)
Putative branched-chain-amino-acid ABC-transporter periplasmatic substrate-binding component n=1 Tax=Octadecabacter arcticus 238 RepID=M9RFV0_9RHOB rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:AKI02209.1}; Flags: Precursor;; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
putative branched-chain-amino-acid ABC-transporter periplasmatic substrate-binding component rbh
scnpilot_solids2_trim150_scaffold_227_10
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8405..9136)
DNA (732bp) protein (244aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBB5_CONWI
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:AKI02210.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_227_11
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9117..9884)
DNA (768bp) protein (256aa)
Putative branched-chain-amino-acid ABC-transporter ATP-binding component n=1 Tax=Octadecabacter arcticus 238 RepID=M9RMM3_9RHOB
putative branched-chain-amino-acid ABC-transporter ATP-binding component
Putative branched-chain-amino-acid ABC-transporter ATP-binding component {ECO:0000313|EMBL:AGI71045.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
scnpilot_solids2_trim150_scaffold_227_12
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9881..10906)
DNA (1026bp) protein (342aa)
Putative branched-chain-amino-acid ABC-transporter permease component n=1 Tax=Octadecabacter arcticus 238 RepID=M9REN3_9RHOB
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:AKI02212.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
putative branched-chain-amino-acid ABC-transporter permease component
scnpilot_solids2_trim150_scaffold_227_13
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10903..11763)
DNA (861bp) protein (287aa)
Putative branched-chain-amino-acid ABC-transporter permease component n=1 Tax=Octadecabacter arcticus 238 RepID=M9RH14_9RHOB
putative branched-chain-amino-acid ABC-transporter permease component
Putative branched-chain-amino-acid ABC-transporter permease component {ECO:0000313|EMBL:AGI71043.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
scnpilot_solids2_trim150_scaffold_227_14
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12012..12662)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000369FC6C
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCA53627.1}; TaxID=953739 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
scnpilot_solids2_trim150_scaffold_227_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13059..14198)
DNA (1140bp) protein (380aa)
homoserine O-acetyltransferase (EC:2.3.1.31); K00641 homoserine O-acetyltransferase [EC:2.3.1.31] rbh
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Homoserine O-acetyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKR1_NAKMY rbh
scnpilot_solids2_trim150_scaffold_227_16
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14220..15536)
DNA (1317bp) protein (439aa)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:KFD43007.1}; EC=2.5.1.49 {ECO:0000313|EMBL:KFD43007.1};; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] rbh
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1YY97_9BACI rbh
scnpilot_solids2_trim150_scaffold_227_17
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15982..17226)
DNA (1245bp) protein (415aa)
manganese transporter n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036588AA rbh
Putative divalent metal cation transporter MntH {ECO:0000313|EMBL:AHH15624.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
Mn2+/Fe2+ transporter; K03322 manganese transport protein rbh
scnpilot_solids2_trim150_scaffold_227_18
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17353..18432)
DNA (1080bp) protein (360aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
ribonucleoside-diphosphate reductase (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Nocardiopsis potens RepID=UPI00034B82DA
scnpilot_solids2_trim150_scaffold_227_19
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18508..21573)
DNA (3066bp) protein (1022aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
ribonucleotide-diphosphate reductase subunit alpha; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000360958D rbh
scnpilot_solids2_trim150_scaffold_227_20
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22103..23125
DNA (1023bp) protein (341aa)
Oxidoreductase domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKR7_NAKMY
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACV80724.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_227_21
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23474..24127
DNA (654bp) protein (218aa)
TetR family transcriptional regulator n=1 Tax=Rhodococcus opacus RepID=UPI00029CBB82
TetR family transcriptional regulator {ECO:0000313|EMBL:KGM13597.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_227_22
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24124..25098
DNA (975bp) protein (325aa)
Putative exporter of polyketide antibiotics,ATPase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JRZ8_SACES rbh
Uncharacterized protein {ECO:0000313|EMBL:KJK43161.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
putative exporter of polyketide antibiotics,ATPase rbh
scnpilot_solids2_trim150_scaffold_227_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

25095..26774
DNA (1680bp) protein (560aa)
Putative exporter of polyketide antibiotics-like protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFK1_CONWI rbh
exporter of polyketide antibiotics-like protein; K09686 antibiotic transport system permease protein rbh
Putative exporter of polyketide antibiotics-like protein {ECO:0000313|EMBL:ADB53794.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_227_24
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26886..27818
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SF36_NOCSJ rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL32957.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_227_25
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27858..28625)
DNA (768bp) protein (256aa)
nucleoside triphosphate pyrophosphohydrolase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
MazG family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKR8_NAKMY
MazG family protein {ECO:0000313|EMBL:ACV80725.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_227_26
unknown

Not on your lists

comp(28631..29599)
DNA (969bp) protein (323aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_227_27
unknown

Not on your lists

comp(29631..29948)
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_227_28
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30124..32121)
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCC8_NAKMY rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV81522.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_227_29
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32369..33016
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000366FDD7
Uncharacterized protein {ECO:0000313|EMBL:GAB89092.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
N-acetylglucosamine-1-phosphateuridyltransferase-like protein
scnpilot_solids2_trim150_scaffold_227_30
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33023..34333
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003803A46 rbh
putative MFS-type transporter rbh
Putative MFS-type transporter {ECO:0000313|EMBL:AGZ41466.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
Displaying items 1-30 of 53 in total

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