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scnpilot_solids2_trim150_scaffold_277

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_277_1
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1172)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Rhodococcus ruber RepID=UPI0003719CF6 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDZ90708.1}; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_277_2
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1169..1849)
DNA (681bp) protein (227aa)
Transcriptional regulator n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNU3_NOCSJ
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABL83478.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids2_trim150_scaffold_277_3
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2050..3000
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037CB94D
Uncharacterized protein {ECO:0000313|EMBL:KGN41780.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
hemerythrin HHE cation binding domain-containing protein
scnpilot_solids2_trim150_scaffold_277_4
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3030..3362)
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EQE0_MODMB
trxA; thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077, ECO:0000313|EMBL:CCH85603.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
scnpilot_solids2_trim150_scaffold_277_5
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3398..3805)
DNA (408bp) protein (136aa)
Transcriptional regulator, HxlR family n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EQD9_MODMB
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:CCH85602.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
scnpilot_solids2_trim150_scaffold_277_6
Rhodococcus sp. Chr-9, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3889..4338)
DNA (450bp) protein (150aa)
glutaredoxin n=1 Tax=Serinicoccus marinus RepID=UPI0003B72AE2
Membrane protein {ECO:0000313|EMBL:KHJ71107.1}; TaxID=713612 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. Chr-9.;"
integral membrane protein
scnpilot_solids2_trim150_scaffold_277_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4491..6626)
DNA (2136bp) protein (712aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEX2_NAKMY rbh
NAD-binding 3-hydroxyacyl-CoA dehydrogenase rbh
3-hydroxyacyl-CoA dehydrogenase NAD-binding {ECO:0000313|EMBL:ACV79873.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_277_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6623..7849)
DNA (1227bp) protein (409aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ACV79872.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ACV79872.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Acetyl-CoA acetyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEX1_NAKMY rbh
scnpilot_solids2_trim150_scaffold_277_9
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7960..9360)
DNA (1401bp) protein (467aa)
ribonuclease D; K03684 ribonuclease D [EC:3.1.13.5] rbh
Putative ribonuclease D n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W8A3_9ACTO rbh
Putative ribonuclease D {ECO:0000313|EMBL:EFL22610.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
scnpilot_solids2_trim150_scaffold_277_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9314..9982)
DNA (669bp) protein (223aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEX0_NAKMY
LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACV79871.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_277_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10212..10868)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEW9_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV79870.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_277_12
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10958..11371)
DNA (414bp) protein (138aa)
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:KID31282.1}; EC=1.8.4.12 {ECO:0000313|EMBL:KID31282.1};; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
peptide-methionine (R)-S-oxide reductase (EC:1.8.4.12); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
methionine sulfoxide reductase n=1 Tax=Sciscionella marina RepID=UPI00035EE28E
scnpilot_solids2_trim150_scaffold_277_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11399..12991)
DNA (1593bp) protein (531aa)
TAP domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEW8_NAKMY rbh
TAP domain-containing protein rbh
TAP domain protein {ECO:0000313|EMBL:ACV79869.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_277_14
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13147..14028
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEW3_NAKMY rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV79864.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_277_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14424..14771
DNA (348bp) protein (116aa)
hypothetical protein; K14941 2-phospho-L-lactate guanylyltransferase [EC:2.7.7.68]
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEW2_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:ACV79863.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_277_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14792..15475
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEW1_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV79862.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_277_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15465..15857
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEW0_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV79861.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_277_18
unknown

Not on your lists

comp(15909..17306)
DNA (1398bp) protein (466aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_277_19
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17518..20013
DNA (2496bp) protein (832aa)
Serine/threonine-protein kinase pknK {ECO:0000313|EMBL:KJF20809.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KJF20809.1};; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00035C8A84
LuxR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_277_20
Mycobacterium vulneris, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20062..20550)
DNA (489bp) protein (163aa)
2Fe-2S-binding domain-containing protein n=1 Tax=Rhodococcus opacus M213 RepID=K8XJQ6_RHOOP
2Fe-2S-binding domain-containing protein {ECO:0000313|EMBL:CDO30557.1}; TaxID=547163 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium vulneris.;"
2Fe-2S-binding domain-containing protein
scnpilot_solids2_trim150_scaffold_277_21
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20543..21403)
DNA (861bp) protein (287aa)
carbon-monoxide dehydrogenase (EC:1.2.99.2)
Carbon-monoxide dehydrogenase n=1 Tax=Rhodococcus opacus M213 RepID=K8X6W4_RHOOP
Carbon-monoxide dehydrogenase {ECO:0000313|EMBL:EKT77314.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
scnpilot_solids2_trim150_scaffold_277_22
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21400..23787)
DNA (2388bp) protein (796aa)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.-.-.-) rbh
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:AFP38869.1}; EC=1.-.-.- {ECO:0000313|EMBL:AFP38869.1};; TaxID=246196 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155).;"
Carbon-monoxide dehydrogenase n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QV64_MYCS2 rbh
scnpilot_solids2_trim150_scaffold_277_23
Mycobacterium vulneris, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23790..24578)
DNA (789bp) protein (263aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QV63_MYCS2
Transporter permease {ECO:0000313|EMBL:CDO30560.1}; TaxID=547163 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium vulneris.;"
binding-protein-dependent transport system inner membrane protein
scnpilot_solids2_trim150_scaffold_277_24
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24622..25434)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00036EE9ED
Taurine ABC transporter permease {ECO:0000313|EMBL:EWT05172.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
ABC transporter, permease component 1
scnpilot_solids2_trim150_scaffold_277_25
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25431..26261)
DNA (831bp) protein (277aa)
ABC transporter n=1 Tax=Rhodococcus opacus M213 RepID=K8XJQ2_RHOOP rbh
Transporter ATPase {ECO:0000313|EMBL:CDO24279.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
transporter ATPase rbh
scnpilot_solids2_trim150_scaffold_277_26
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26385..27431)
DNA (1047bp) protein (349aa)
Substrate-binding protein, ABC-type transporter n=1 Tax=Rhodococcus opacus M213 RepID=K8X6V8_RHOOP rbh
Substrate-binding protein, ABC transporter {ECO:0000313|EMBL:KGN41565.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
substrate-binding protein, ABC-type transporter rbh
scnpilot_solids2_trim150_scaffold_277_27
unknown

Not on your lists

comp(27512..27883)
DNA (372bp) protein (124aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_277_28
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27880..28872)
DNA (993bp) protein (331aa)
methylenetetrahydromethanopterin reductase (EC:1.5.99.11) rbh
Methylenetetrahydromethanopterin reductase n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=I7FJF4_MYCS2 rbh
5,10-methylenetetrahydromethanopterin reductase {ECO:0000313|EMBL:CDO24276.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
scnpilot_solids2_trim150_scaffold_277_29
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28947..30122
DNA (1176bp) protein (392aa)
adenine deaminase; K15358 enamidase [EC:3.5.2.18] rbh
Adenine deaminase n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UDS9_MYCVA rbh
Adenine deaminase {ECO:0000313|EMBL:EJZ05397.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;"
scnpilot_solids2_trim150_scaffold_277_30
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30226..30930
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00035D6B09
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CAM01220.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
Displaying items 1-30 of 73 in total

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