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scnpilot_solids2_trim150_scaffold_217_26

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(22895..23158)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Actinopolyspora mortivallis RepID=UPI00036933DB similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 84.0
  • Bit_score: 155
  • Evalue 2.70e-35
transcription factor WhiB similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 82.0
  • Bit_score: 154
  • Evalue 1.90e-35
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 82.0
  • Bit_score: 154
  • Evalue 8.50e-35

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGGATTGGCGCCACCGCGCTGTTTGCCGTGACGAGGACCCGGAGCTGTTTTTCCCCGTAGGGAACTCCGGACCTGCGCTGCTGCAGATCGCCGAGGCCAAGGCGGTGTGCGAACGCTGCCCCGTGATCAACGAGTGCCTGAACTGGGCGCTGGAGACGGGTCAGGATGCGGGCGTGTGGGGCGGTCTGAGCGAGGATGAGCGTCGGTCCCTCAAGCGGCGCCGGGCCCGCGCTCGCGCGCGCAACAACAGCATGGCATCCTGA
PROTEIN sequence
Length: 88
MDWRHRAVCRDEDPELFFPVGNSGPALLQIAEAKAVCERCPVINECLNWALETGQDAGVWGGLSEDERRSLKRRRARARARNNSMAS*