ggKbase home page

scnpilot_solids2_trim150_scaffold_217

Search features with annotation key words

Displaying items 1-30 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_217_1
unknown

Not on your lists

comp(525..1076)
DNA (552bp) protein (184aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_217_2
actinobacterium acAMD-5, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2076..2975
DNA (900bp) protein (300aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000372B756
ATP-dependent Clp protease ATP-binding protein {ECO:0000313|EMBL:KGA08887.1}; TaxID=1504319 species="Bacteria; Actinobacteria.;" source="actinobacterium acAMD-5.;"
clpC; Negative regulator of genetic competence ClpC/MecB
scnpilot_solids2_trim150_scaffold_217_3
unknown

Not on your lists

3508..3912
DNA (405bp) protein (135aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_217_4
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4105..4830)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AAM1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJK42861.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_217_5
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5103..6539)
DNA (1437bp) protein (479aa)
FRG domain-containing protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HS82_BIFBI rbh
Uncharacterized protein {ECO:0000313|EMBL:CEI30005.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
FRG domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_217_6
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7192..7329)
DNA (138bp) protein (46aa)
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:CCH75958.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
scnpilot_solids2_trim150_scaffold_217_7
Streptomyces sp. PVA 94-07, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7794..8546)
DNA (753bp) protein (251aa)
elastin-like protein n=1 Tax=Ruania albidiflava RepID=UPI0003B48DFB rbh
Elastin-like protein {ECO:0000313|EMBL:ESQ06785.1}; TaxID=1223307 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PVA 94-07.;"
elastin-like protein
scnpilot_solids2_trim150_scaffold_217_8
Streptomyces sp. PVA 94-07, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8543..9310)
DNA (768bp) protein (256aa)
ABC transporter ATP-binding protein n=1 Tax=Ruania albidiflava RepID=UPI0003B4B688 rbh
ABC transporter {ECO:0000313|EMBL:ESQ06784.1}; TaxID=1223307 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PVA 94-07.;"
ABC transporter
scnpilot_solids2_trim150_scaffold_217_9
Streptomyces sp. PVA 94-07, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9267..9812)
DNA (546bp) protein (182aa)
Regulatory protein TetR n=1 Tax=Streptomyces sp. PVA 94-07 RepID=V4KMG8_9ACTO
Regulatory protein TetR {ECO:0000313|EMBL:ESQ06783.1}; TaxID=1223307 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PVA 94-07.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_217_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10249..10647)
DNA (399bp) protein (133aa)
twitching motility protein PilT n=1 Tax=Actinomyces oris RepID=UPI0002003BBC
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
scnpilot_solids2_trim150_scaffold_217_11
unknown

Not on your lists

comp(10644..10898)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_217_12
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11106..11714
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XSG4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON21960.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
resolvase domain-containing protein
scnpilot_solids2_trim150_scaffold_217_13
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11880..12167
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1B5R4_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH51190.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
scnpilot_solids2_trim150_scaffold_217_14
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12164..12451
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1B5R3_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH51189.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
scnpilot_solids2_trim150_scaffold_217_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12738..13433)
DNA (696bp) protein (232aa)
Methyltransferase type 11 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0R5_CONWI
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ADB53999.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_217_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13903..14793
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XED6_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV77794.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_217_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14900..15511)
DNA (612bp) protein (204aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEE3_NAKMY
ybaK/ebsC protein
scnpilot_solids2_trim150_scaffold_217_18
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15551..16645)
DNA (1095bp) protein (365aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEE6_NAKMY
glycine betaine ABC transporter substrate-binding protein; K05845 osmoprotectant transport system substrate-binding protein
Substrate-binding region of ABC-type glycine betaine transport system {ECO:0000313|EMBL:ACV77804.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_217_19
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16712..17473)
DNA (762bp) protein (254aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEE7_NAKMY rbh
binding-protein-dependent transporters inner membrane component; K05846 osmoprotectant transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACV77805.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_217_20
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17449..18096)
DNA (648bp) protein (216aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEE8_NAKMY rbh
binding-protein-dependent transporters inner membrane component; K05846 osmoprotectant transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACV77806.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_217_21
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18093..19331)
DNA (1239bp) protein (413aa)
Glycine betaine/L-proline ABC transporter, ATPase subunit n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEE9_NAKMY rbh
glycine betaine/L-proline ABC transporter ATPase rbh
Glycine betaine/L-proline ABC transporter, ATPase subunit {ECO:0000313|EMBL:ACV77807.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_217_22
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19715..20398
DNA (684bp) protein (228aa)
RNA polymerase sigma factor n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEF1_NAKMY rbh
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_217_23
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20400..20744
DNA (345bp) protein (115aa)
Anti-sigma factor n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEF2_NAKMY
anti-sigma factor
Anti-sigma factor {ECO:0000313|EMBL:ACV77810.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_217_24
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21105..21320
DNA (216bp) protein (72aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEF3_NAKMY
biotin/lipoyl attachment domain-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:ACV77811.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_217_25
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21423..22886
DNA (1464bp) protein (488aa)
Signal transduction histidine kinase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEF4_NAKMY rbh
signal transduction histidine kinase rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:ACV77812.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_217_26
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22895..23158)
DNA (264bp) protein (88aa)
transcriptional regulator n=1 Tax=Actinopolyspora mortivallis RepID=UPI00036933DB
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_217_27
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23568..24485)
DNA (918bp) protein (306aa)
Diacylglycerol kinase catalytic region n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEF6_NAKMY rbh
diacylglycerol kinase catalytic subunit rbh
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:ACV77814.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_217_28
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24537..24947
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEF7_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV77815.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_217_29
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24904..25446)
DNA (543bp) protein (181aa)
GCN5-related N-acetyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEF8_NAKMY
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACV77816.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_217_30
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25507..26199)
DNA (693bp) protein (231aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglycerate mutase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEF9_NAKMY
Phosphoglycerate mutase {ECO:0000313|EMBL:ACV77817.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying items 1-30 of 143 in total

View Taxonomy