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scnpilot_solids2_trim150_scaffold_239_2

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(78..386)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Frankia sp. BMG5.12 RepID=UPI0003676458 similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 57.0
  • Bit_score: 62
  • Evalue 2.80e-07
Excisionase {ECO:0000313|EMBL:KDN23933.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 91.0
  • Bit_score: 65
  • Evalue 4.60e-08

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Taxonomy

Amycolatopsis rifamycinica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGGGGACTGACACCGATTCGCTACGCACGCTGACCACCCGGGCGACCACATTGCTCGCCGAACTGGCGGCGGCGGTGGCGGAGATCCAGGCCGTGGCCGCGGAGGTCCCGGCGGTCGATCCTCCGGCGGCGGTGTCGCGGAGCCTGTTGACCGTGGGCCAGGCTGCGGAGGCGCTCGGGTTGTCGCGGTCGGCGGTCTACACGCTGATCGGCTCCGGGTCGCTCGGCAGCGTGCGGATCGGGAGCCGTCGGCGGATTCCGGCGGCCGCAGTGGACGCCTACGTCGCCGCCCTGGGCGGAGTTGCGTAG
PROTEIN sequence
Length: 103
MGTDTDSLRTLTTRATTLLAELAAAVAEIQAVAAEVPAVDPPAAVSRSLLTVGQAAEALGLSRSAVYTLIGSGSLGSVRIGSRRRIPAAAVDAYVAALGGVA*