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scnpilot_solids2_trim150_scaffold_203_3

Organism: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 2356..2964

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase n=1 Tax=Mycobacterium canettii (strain CIPT 140010059) RepID=G0TJK0_MYCCP similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 201.0
  • Bit_score: 285
  • Evalue 3.10e-74
RNA-directed DNA polymerase {ECO:0000313|EMBL:ETW22322.1}; TaxID=1436723 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 201.0
  • Bit_score: 298
  • Evalue 8.40e-78
RNA-directed DNA polymerase similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 201.0
  • Bit_score: 285
  • Evalue 9.70e-75

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Taxonomy

Mycobacterium gastri → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
GTGGGCAAGTCGAGTGAGGCGAGCAAGTCGTTTGTGATTTCCAAGCAGTTGGTGTTGCGGGCGTACCAGCAGGTCAAGGCCAACAAGGGTGCGGCCGGGGTGGACGGGTGTTCCACCGAGGACTTCGAAGCGGATCTGAAGAACAACCTGTACAAGATCTGGAATCGGATGTCCTCGGGGACGTACTTTCCGCCTGCGGTGCGGGCGGTGGAGATTCCCAAGCCGCATGGCGGCGGGGTACGGGTGCTGGGAGTGCCCACGGTCGGCGACAGAATCGCTCAGACCGTGGCGGCGCTGACGTTGGAGCCGAGGACGGAAGCGATCTTCCATCCGGACTCCTACGGATACCGGCCGGGCAGGTCGGCGCGTCAGGCGCTGACGGCCTGCCGGGATCGGTGCTGGAAGAAGGACTGGGTGCTCGATCTGGACATCCGCTCGTTCTTCGACTCCTTGGACCACGACCTCGTCGTCAAGGCGGTGGCGGCGAACATCACCACCGAACAGCGTTGGGTGTTGCTGTATGTGCGGCGGTGGCTGACCGCCGGGCTGCAGTTGCCCGATGGCACCCTGCAGCGACGGGACCGTGGGACCCCGCAGGGGTCGTTATGA
PROTEIN sequence
Length: 203
VGKSSEASKSFVISKQLVLRAYQQVKANKGAAGVDGCSTEDFEADLKNNLYKIWNRMSSGTYFPPAVRAVEIPKPHGGGVRVLGVPTVGDRIAQTVAALTLEPRTEAIFHPDSYGYRPGRSARQALTACRDRCWKKDWVLDLDIRSFFDSLDHDLVVKAVAANITTEQRWVLLYVRRWLTAGLQLPDGTLQRRDRGTPQGSL*