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scnpilot_solids2_trim150_scaffold_203

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_203_1
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(75..1133)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1ZRB2_9MICC rbh
Contig_13, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03858.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
phage-related integrase rbh
scnpilot_solids2_trim150_scaffold_203_2
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1240..1437)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B3AF12
Uncharacterized protein {ECO:0000313|EMBL:ETY70520.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
scnpilot_solids2_trim150_scaffold_203_3
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2356..2964
DNA (609bp) protein (203aa)
RNA-directed DNA polymerase n=1 Tax=Mycobacterium canettii (strain CIPT 140010059) RepID=G0TJK0_MYCCP
RNA-directed DNA polymerase {ECO:0000313|EMBL:ETW22322.1}; TaxID=1436723 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
RNA-directed DNA polymerase
scnpilot_solids2_trim150_scaffold_203_4
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3134..3619
DNA (486bp) protein (162aa)
Integrase/recombinase n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WKV1_9NOCA
Integrase/recombinase {ECO:0000313|EMBL:EID77017.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
integrase/recombinase
scnpilot_solids2_trim150_scaffold_203_5
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3673..4395)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000370AE01 rbh
transposase
Transposase {ECO:0000313|EMBL:ELB92269.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
scnpilot_solids2_trim150_scaffold_203_6
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4594..5877)
DNA (1284bp) protein (428aa)
Transposase mutator type n=1 Tax=Frankia sp. CN3 RepID=G6H7Z8_9ACTO rbh
Transposase, Mutator family protein {ECO:0000313|EMBL:EUA24728.1}; TaxID=1299333 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi 3993.;"
transposase, mutator family protein rbh
scnpilot_solids2_trim150_scaffold_203_7
unknown

Not on your lists

comp(5964..6182)
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_203_8
unknown

Not on your lists

comp(6158..6355)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_203_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6682..8127
DNA (1446bp) protein (482aa)
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-] rbh
Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG67_NAKMY rbh
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:ACV80069.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_203_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8176..9243
DNA (1068bp) protein (356aa)
cytochrome d ubiquinol oxidase subunit II; K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-] rbh
Cytochrome d ubiquinol oxidase, subunit II n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG66_NAKMY rbh
Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:ACV80068.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_203_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9240..11000
DNA (1761bp) protein (587aa)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG64_NAKMY rbh
cysteine ABC transporter permease/ATP-binding protein CydD; K16013 ATP-binding cassette, subfamily C, bacterial CydD rbh
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD {ECO:0000313|EMBL:ACV80066.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_203_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10997..12751
DNA (1755bp) protein (585aa)
Sigma 54 interacting domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG63_NAKMY rbh
sigma 54 interacting domain-containing protein; K16012 ATP-binding cassette, subfamily C, bacterial CydC rbh
Sigma 54 interacting domain protein {ECO:0000313|EMBL:ACV80065.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_203_13
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12708..12965)
DNA (258bp) protein (86aa)
LuxR family transcriptional regulator n=1 Tax=Actinobaculum urinale RepID=UPI0003B64ED7
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJK51135.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
two component LuxR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_203_14
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13052..13399
DNA (348bp) protein (116aa)
Transcriptional repressor, CopY family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG62_NAKMY
CopY family transcriptional regulator; K07737 putative transcriptional regulator
Transcriptional repressor, CopY family {ECO:0000313|EMBL:ACV80064.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_203_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13417..14478
DNA (1062bp) protein (354aa)
Peptidase M48 Ste24p n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG61_NAKMY
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:ACV80063.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_203_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14516..16807)
DNA (2292bp) protein (764aa)
Copper resistance D domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XGL6_NAKMY
copper resistance D domain-containing protein; K02351 putative membrane protein; K07245 putative copper resistance protein D
Copper resistance D domain protein {ECO:0000313|EMBL:ACV78199.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_203_17
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16804..17502)
DNA (699bp) protein (233aa)
ctaE; putative cytochrome c oxidase subunit 3 (EC:1.9.3.1) rbh
Putative cytochrome c oxidase subunit 3 {ECO:0000313|EMBL:CCH28948.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CCH28948.1};; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Putative cytochrome c oxidase subunit 3 n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JXI0_SACES rbh
scnpilot_solids2_trim150_scaffold_203_18
unknown

Not on your lists

comp(17615..17953)
DNA (339bp) protein (113aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_203_19
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18240..18584)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI00037B4708
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADB77582.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
scnpilot_solids2_trim150_scaffold_203_20
unknown

Not on your lists

18693..19124
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_203_21
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19208..20575
DNA (1368bp) protein (456aa)
ErfK/YbiS/YcfS/YnhG family lipoprotein n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WYE5_9NOCA rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:KJK33947.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
ErfK/YbiS/YcfS/YnhG family protein rbh
scnpilot_solids2_trim150_scaffold_203_22
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20572..21399
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XSV3_MICPN
Nuclear export factor GLE1 {ECO:0000313|EMBL:KGH48300.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_203_23
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21396..22310
DNA (915bp) protein (305aa)
Cation diffusion facilitator family transporter n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9X7_NAKMY rbh
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ACV81177.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_203_24
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22449..22745
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3BAB1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EFP58029.1}; TaxID=188626 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus sp. Ellin185.;"
hypothetical protein; K09981 hypothetical protein
scnpilot_solids2_trim150_scaffold_203_25
unknown

Not on your lists

22870..23115
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_203_26
unknown

Not on your lists

comp(23044..23223)
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_203_27
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23393..25228
DNA (1836bp) protein (612aa)
Heavy metal translocating P-type ATPase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AB62_9MICO
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EPD86358.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
ATPase P
scnpilot_solids2_trim150_scaffold_203_28
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25298..25876
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037E9812
Copper resistance protein CopC {ECO:0000313|EMBL:KEI45666.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
copper resistance protein CopC
scnpilot_solids2_trim150_scaffold_203_29
Streptomyces rochei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26789..27529
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Streptomyces rochei RepID=F2Z8X0_STRRO
Uncharacterized protein {ECO:0000313|EMBL:BAK19900.1}; TaxID=1928 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rochei (Streptomyces parvullus).;"
scnpilot_solids2_trim150_scaffold_203_30
unknown

Not on your lists

comp(27618..28280)
DNA (663bp) protein (221aa)

This feature has no annotations

Displaying items 1-30 of 77 in total

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