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scnpilot_solids2_trim150_scaffold_3432

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3432_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3..422)
DNA (420bp) protein (140aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9Z6_SINAD
DNA-directed RNA polymerase subunit sigma24
DNA-directed RNA polymerase specialized sigma subunit, sigma24 {ECO:0000313|EMBL:AGA25451.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_3432_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(488..1147)
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DJB4_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28771.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_3432_3
unknown

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1398..2366
DNA (969bp) protein (323aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3432_4
Cyanobium sp. CACIAM 14, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(2570..2677)
DNA (108bp) protein (36aa)
Cyanate hydratase {ECO:0000256|HAMAP-Rule:MF_00535}; Short=Cyanase {ECO:0000256|HAMAP-Rule:MF_00535};; EC=4.2.1.104 {ECO:0000256|HAMAP-Rule:MF_00535};; Cyanate hydrolase {ECO:0000256|HAMAP-Rule:MF_00535}; Cyanate lyase {ECO:0000256|HAMAP-Rule:MF_00535}; TaxID=1496688 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium sp. CACIAM 14.;"
Cyanate hydratase n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KV69_9SYNC
cyanate hydratase
scnpilot_solids2_trim150_scaffold_3432_5
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(2708..3013)
DNA (306bp) protein (102aa)
Cyanate hydratase {ECO:0000256|HAMAP-Rule:MF_00535}; Short=Cyanase {ECO:0000256|HAMAP-Rule:MF_00535};; EC=4.2.1.104 {ECO:0000256|HAMAP-Rule:MF_00535};; Cyanate hydrolase {ECO:0000256|HAMAP-Rule:MF_00535}; Cyanate lyase {ECO:0000256|HAMAP-Rule:MF_00535}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
Cyanate hydratase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDK4_9CHLR
cyanate hydratase
scnpilot_solids2_trim150_scaffold_3432_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3086..4093)
DNA (1008bp) protein (336aa)
pyridoxal-5''''-phosphate-dependent protein subunit beta n=1 Tax=Schlesneria paludicola RepID=UPI00029AA1F6 rbh
threonine dehydratase rbh
Threonine dehydratase {ECO:0000313|EMBL:AGA31575.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_3432_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(4322..5140)
DNA (819bp) protein (273aa)
hypothetical protein; K07152 id=12554039 bin=CNBR_ACIDO species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
scnpilot_solids2_trim150_scaffold_3432_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(5155..6648)
DNA (1494bp) protein (498aa)
cytochrome c oxidase, subunit I (EC:1.9.3.1) id=12554038 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
cytochrome c oxidase, subunit I (EC:1.9.3.1)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying 8 items

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