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scnpilot_solids2_trim150_scaffold_2403

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2403_1

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comp(447..1385)
DNA (939bp) protein (313aa)
GDP-L-fucose synthase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DM68_SINAD
Marine sediment metagenome DNA, contig: S01H1_L04575 {ECO:0000313|EMBL:GAF68396.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nucleoside-diphosphate-sugar epimerase
scnpilot_solids2_trim150_scaffold_2403_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1579..2535
DNA (957bp) protein (319aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DN29_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30248.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_2403_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2532..3536
DNA (1005bp) protein (335aa)
Periplasmic molybdate-binding protein/domain protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGD8_SINAD
periplasmic molybdate-binding protein
Periplasmic molybdate-binding protein/domain protein {ECO:0000313|EMBL:AGA27746.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_2403_4
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3520..4797)
DNA (1278bp) protein (426aa)
Putative secreted protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2AXP8_9PLAN rbh
Putative secreted protein {ECO:0000313|EMBL:EMB17472.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_2403_5
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(4903..6156)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5331 rbh
cycloisomerase rbh
Tax=RBG_13_Planctomycetes_60_9_curated
scnpilot_solids2_trim150_scaffold_2403_6
Cyanothece sp. CCY0110, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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6452..6700
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IZM0_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:EAZ88075.1}; TaxID=391612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. CCY0110.;"
scnpilot_solids2_trim150_scaffold_2403_7
CG_Arma_02, Armatimonadetes, Bacteria

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6690..7118
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IZM1_9CHRO
PIN domain-containing protein
Tax=CG_Arma_02
scnpilot_solids2_trim150_scaffold_2403_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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7234..9654
DNA (2421bp) protein (807aa)
Putative RND superfamily exporter n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAZ0_SINAD rbh
RND superfamily exporter rbh
Putative RND superfamily exporter {ECO:0000313|EMBL:AGA25836.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_2403_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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9787..11175
DNA (1389bp) protein (463aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Singulisphaera acidiphila RepID=L0D7N8_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA24666.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_2403_10
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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11661..12197
DNA (537bp) protein (179aa)
isochorismatase n=1 Tax=Schlesneria paludicola RepID=UPI000299FD2A
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:ADY58314.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
scnpilot_solids2_trim150_scaffold_2403_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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12349..12930
DNA (582bp) protein (194aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAB2_SINAD
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA25773.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_2403_trna_1
unknown

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13015..13086
DNA (72bp)
transferRNA Arg
Displaying 12 items

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