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scnpilot_solids2_trim150_scaffold_3341

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3341_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..111
DNA (111bp) protein (37aa)
Single-stranded DNA-binding protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK37_OLICO
putative single-stranded DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scnpilot_solids2_trim150_scaffold_3341_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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98..682
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8N8G2_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26857.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative nuclease
scnpilot_solids2_trim150_scaffold_3341_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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679..1227
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKY1_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26858.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3341_4
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1237..1905
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BR80_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08324.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_3341_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2049..2615
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK33_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig134, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53755.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3341_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2640..3344
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK32_OLICO rbh
Bradyrhizobium elkanii strain UASWS1015 Contig134, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53756.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_3341_7
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3513..3737
DNA (225bp) protein (75aa)
UspA domain protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X5V4_RHIFR
UspA domain protein {ECO:0000313|EMBL:CDM62358.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
UspA domain-containing protein
scnpilot_solids2_trim150_scaffold_3341_8
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3878..4294
DNA (417bp) protein (139aa)
UspA domain protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X5V4_RHIFR
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:AFL51260.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
scnpilot_solids2_trim150_scaffold_3341_9
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4364..4609)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZX5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETR79416.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3341_10
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4641..5261)
DNA (621bp) protein (207aa)
Autoinducer synthase n=2 Tax=Oligotropha carboxidovorans RepID=B6JK74_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig144, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53396.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
autoinducer synthase
scnpilot_solids2_trim150_scaffold_3341_11
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5382..5654)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QVL7_9BRAD
Polymerase {ECO:0000313|EMBL:KFG70940.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3341_12
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5735..6058)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BR87_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08331.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_3341_13
unknown

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comp(6252..6890)
DNA (639bp) protein (213aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3341_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7092..7181
DNA (90bp) protein (30aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK71_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08333.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Displaying 14 items

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