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scnpilot_solids2_trim150_scaffold_685

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_685_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96..1070)
DNA (975bp) protein (325aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZT6_9RHIZ
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
scnpilot_solids2_trim150_scaffold_685_2
unknown

Not on your lists

1254..1925
DNA (672bp) protein (224aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_685_3
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1947..4442)
DNA (2496bp) protein (832aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
Glycyl-tRNA synthetase subunit beta n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7GA69_9RHIZ rbh
glyS; glycyl-tRNA synthetase, beta subunit
scnpilot_solids2_trim150_scaffold_685_4
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4677..4892
DNA (216bp) protein (72aa)
Helix-turn-helix protein, CopG n=5 Tax=Rhizobium meliloti RepID=F6BTN3_SINMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAC45864.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
scnpilot_solids2_trim150_scaffold_685_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4886..5251
DNA (366bp) protein (122aa)
Toxin-antitoxin system PIN domain-containing protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SHE0_RHIET
toxin-antitoxin system PIN domain-containing protein
Toxin-antitoxin system PIN domain-containing protein {ECO:0000313|EMBL:AJC83366.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
scnpilot_solids2_trim150_scaffold_685_6
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5265..5849)
DNA (585bp) protein (195aa)
isochorismatase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000370A975
isochorismatase
Nicotinamidase-like amidase {ECO:0000313|EMBL:EJN12134.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
scnpilot_solids2_trim150_scaffold_685_7
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5849..6799)
DNA (951bp) protein (317aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14); K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
Glycine--tRNA ligase alpha subunit n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CCR9_9RHIZ rbh
scnpilot_solids2_trim150_scaffold_685_8
unknown

Not on your lists

7024..7332
DNA (309bp) protein (103aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_685_9
unknown

Not on your lists

7374..7697
DNA (324bp) protein (108aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_685_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7741..9534)
DNA (1794bp) protein (598aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZT1_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53784.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
tetratricopeptide repeat protein rbh
scnpilot_solids2_trim150_scaffold_685_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9713..10729)
DNA (1017bp) protein (339aa)
Polyprenyl synthetase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZS8_9RHIZ
Polyprenyl synthetase {ECO:0000313|EMBL:EHK53781.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
geranylgeranyl pyrophosphate synthase
scnpilot_solids2_trim150_scaffold_685_12
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10880..11104
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YCW7_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESY78622.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
scnpilot_solids2_trim150_scaffold_685_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11107..11904
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZS5_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53778.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
methyltransferase small rbh
scnpilot_solids2_trim150_scaffold_685_14
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11980..12849
DNA (870bp) protein (290aa)
peptidase S49 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DAE8FE
Peptidase S49 {ECO:0000313|EMBL:CDX42268.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
peptidase S49
scnpilot_solids2_trim150_scaffold_685_15
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12984..13169
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KU01_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB47474.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_685_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13181..14278
DNA (1098bp) protein (366aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZS2_9RHIZ
scnpilot_solids2_trim150_scaffold_685_17
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14265..14813
DNA (549bp) protein (183aa)
UPI0003CED068 related cluster n=1 Tax=unknown RepID=UPI0003CED068
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
molybdenum cofactor biosynthesis protein B
scnpilot_solids2_trim150_scaffold_685_18
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15270..16424
DNA (1155bp) protein (385aa)
radical SAM protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000382B5CD rbh
radical SAM family protein rbh
Radical SAM {ECO:0000313|EMBL:ABG62104.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_685_19
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16591..17289
DNA (699bp) protein (233aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4]
UPI0003CE9EC9 related cluster n=1 Tax=unknown RepID=UPI0003CE9EC9
scnpilot_solids2_trim150_scaffold_685_20
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17344..17835)
DNA (492bp) protein (164aa)
ATP synthase subunit b n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KS12_MESAW
F0F1-type ATP synthase, beta subunit
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_685_21
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17839..18414)
DNA (576bp) protein (192aa)
UPI0003CE2297 related cluster n=1 Tax=unknown RepID=UPI0003CE2297
F0F1-type ATP synthase, beta subunit
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
scnpilot_solids2_trim150_scaffold_685_22
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18477..18704)
DNA (228bp) protein (76aa)
F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K {ECO:0000313|EMBL:EDQ32082.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EDQ32082.1};; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
H+transporting two-sector ATPase C subunit; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
ATP synthase subunit C n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DDJ6_9RHIZ
scnpilot_solids2_trim150_scaffold_685_23
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18772..19530)
DNA (759bp) protein (253aa)
ATP synthase subunit a n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFS8_RHITR rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
atpB; ATP synthase F0, A subunit rbh
scnpilot_solids2_trim150_scaffold_685_24
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19582..19986)
DNA (405bp) protein (135aa)
FoF1 ATP synthase, subunit I n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7L6_9RHIZ
FoF1 ATP synthase, subunit I {ECO:0000313|EMBL:CCV12296.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
FoF1 ATP synthase subunit I; K02116 ATP synthase protein I
scnpilot_solids2_trim150_scaffold_685_25
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20197..21366)
DNA (1170bp) protein (390aa)
UPI0003CE3A50 related cluster n=1 Tax=unknown RepID=UPI0003CE3A50 rbh
ATP-binding protein {ECO:0000313|EMBL:ESY95015.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
cell wall hydrolyses involved in spore germination rbh
scnpilot_solids2_trim150_scaffold_685_26
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22003..23427)
DNA (1425bp) protein (475aa)
GTP-binding protein Der n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EC3960 rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ribosome-associated GTPase EngA; K03977 GTP-binding protein rbh
scnpilot_solids2_trim150_scaffold_685_27
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23437..24102)
DNA (666bp) protein (222aa)
membrane protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000302CDCB
Uncharacterized protein {ECO:0000313|EMBL:CDX42983.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_685_28
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24307..24873)
DNA (567bp) protein (189aa)
Putative membrane protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQV0_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:EJN03056.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
nitrate reductase
scnpilot_solids2_trim150_scaffold_685_29
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24998..25201
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPD4_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJK85881.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
scnpilot_solids2_trim150_scaffold_685_30
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25318..26310
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11KI5_MESSB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABG62090.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Displaying items 1-30 of 32 in total

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