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scnpilot_solids2_trim150_scaffold_1684

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1684_1
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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245..604
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BYV4_9BACT
Toxin Fic {ECO:0000313|EMBL:KJU84308.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1684_2

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comp(510..3701)
DNA (3192bp) protein (1064aa)
RND efflux system, inner membrane transporter CmeB n=1 Tax=uncultured bacterium A1Q1_fos_1093 RepID=L7VZ12_9BACT
RND efflux system, inner membrane transporter CmeB {ECO:0000313|EMBL:AGC72313.1}; TaxID=1256542 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1093.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_solids2_trim150_scaffold_1684_3

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comp(3802..6951)
DNA (3150bp) protein (1050aa)
RND efflux system, inner membrane transporter CmeB n=1 Tax=uncultured bacterium A1Q1_fos_1093 RepID=L7VZ12_9BACT
RND efflux system, inner membrane transporter CmeB {ECO:0000313|EMBL:AGC72313.1}; TaxID=1256542 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1093.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_solids2_trim150_scaffold_1684_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6979..8127)
DNA (1149bp) protein (383aa)
Acriflavine resistance protein E n=1 Tax=uncultured bacterium A1Q1_fos_1093 RepID=L7VXG3_9BACT
Putative RND-type efflux pump membrane fusion protein {ECO:0000313|EMBL:GAO45721.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
RND family efflux transporter MFP subunit; K03585 membrane fusion protein
scnpilot_solids2_trim150_scaffold_1684_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8093..9445)
DNA (1353bp) protein (451aa)
Outer membrane efflux protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC80_CHIPD
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ACU59463.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_1684_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9820..10542
DNA (723bp) protein (241aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO43223.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids2_trim150_scaffold_1684_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10616..11911)
DNA (1296bp) protein (432aa)
Radical SAM domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NK36_9SPHI
Radical SAM protein {ECO:0000313|EMBL:AHF14034.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
radical SAM protein rbh
scnpilot_solids2_trim150_scaffold_1684_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(11908..12489)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365E104
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1684_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(12476..13534)
DNA (1059bp) protein (353aa)
arginase/agmatinase/formiminoglutamase; K01480 agmatinase [EC:3.5.3.11] rbh
Arginase/agmatinase/formiminoglutamase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPA9_CHIPD rbh
Agmatinase {ECO:0000313|EMBL:KIC89955.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Displaying 9 items

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