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scnpilot_solids2_trim150_scaffold_132

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_132_1
unknown

Not on your lists

3..974
DNA (972bp) protein (324aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_132_2
unknown

Not on your lists

comp(1023..1865)
DNA (843bp) protein (281aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_132_3
Capnocytophaga sp. oral taxon 332, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2058..2762
DNA (705bp) protein (235aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1127692 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 332 str. F0381.;"
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22]
Uridylate kinase n=1 Tax=Capnocytophaga sp. oral taxon 332 str. F0381 RepID=L1NVW2_9FLAO
scnpilot_solids2_trim150_scaffold_132_4
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2798..3364
DNA (567bp) protein (189aa)
Ribosome-recycling factor n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXD1_SOLCM
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_132_5
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3495..3989
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363D750
DNA damage-inducible protein DinB {ECO:0000313|EMBL:ETZ24610.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_132_6
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4125..6449
DNA (2325bp) protein (775aa)
OmpA/MotB domain protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6LAG0_SAPGL
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AFC24445.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
scnpilot_solids2_trim150_scaffold_132_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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6512..7318
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KWK9_HALH1
hypothetical protein; K07043
Tax=RBG_13_Pacearchaeota_36_9_curated
scnpilot_solids2_trim150_scaffold_132_8
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7523..8491
DNA (969bp) protein (323aa)
polyprenyl synthetase (EC:2.5.1.-); K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Polyprenyl synthetase id=4182824 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
Tax=GWE2_Bacteroidetes_32_14_curated
scnpilot_solids2_trim150_scaffold_132_9
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8511..9353
DNA (843bp) protein (281aa)
N-acetylglucosamine kinase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAB0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KFD38736.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str. Yellowstone.;"
putative N-acetylglucosamine kinase
scnpilot_solids2_trim150_scaffold_132_10
unknown

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9432..9890
DNA (459bp) protein (153aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_132_11
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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9940..11370
DNA (1431bp) protein (477aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
pyk; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40]
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000367894E rbh
scnpilot_solids2_trim150_scaffold_132_12
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

11685..12788
DNA (1104bp) protein (368aa)
id=4204174 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=CG_Bacteroid_02
scnpilot_solids2_trim150_scaffold_132_13
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(12794..14692)
DNA (1899bp) protein (633aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002F93AEA rbh
Sulfatase {ECO:0000313|EMBL:KIF31653.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
phosphoglycerol transferase family protein, alkaline phosphatase superfamily rbh
scnpilot_solids2_trim150_scaffold_132_14
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14735..15316)
DNA (582bp) protein (194aa)
tRNA-hydroxylase; K06169 tRNA-(ms[2]io[6]A)-hydroxylase [EC:1.-.-.-]
tRNA-hydroxylase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L520_HALH1
tRNA hydroxylase {ECO:0000313|EMBL:KGE86661.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
scnpilot_solids2_trim150_scaffold_132_15
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15321..16433)
DNA (1113bp) protein (371aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
galactokinase; K00849 galactokinase [EC:2.7.1.6] rbh
Galactokinase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RRH6_9CLOT rbh
scnpilot_solids2_trim150_scaffold_132_16
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16430..17107)
DNA (678bp) protein (226aa)
Uncharacterized protein id=3960803 bin=GWF2_Bacteroidetes_38_335 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_solids2_trim150_scaffold_132_17
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17282..18805
DNA (1524bp) protein (508aa)
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22); K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] rbh
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
Asparagine--tRNA ligase n=1 Tax=Saprospira grandis DSM 2844 RepID=J0P717_9SPHI rbh
scnpilot_solids2_trim150_scaffold_132_18
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

18912..19658
DNA (747bp) protein (249aa)
ribonuclease III; K03685 ribonuclease III [EC:3.1.26.3]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037941DE
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_solids2_trim150_scaffold_132_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19678..20442)
DNA (765bp) protein (255aa)
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] rbh
family 2 glycosyl transferase id=1877692 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 rbh
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_solids2_trim150_scaffold_132_20
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

20563..21807
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JVH2_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_132_21
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22135..24036
DNA (1902bp) protein (634aa)
ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
ATP-dependent DNA helicase, RecQ family n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KUZ6_HALH1
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KJS06918.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
scnpilot_solids2_trim150_scaffold_132_22
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(24105..24686)
DNA (582bp) protein (194aa)
50S ribosomal protein L25 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSZ2_CHIPD
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_132_23
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24717..25661)
DNA (945bp) protein (315aa)
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] rbh
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Sapros
Ribose-phosphate pyrophosphokinase n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L9A6_SAPGL rbh
scnpilot_solids2_trim150_scaffold_132_24
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(25904..26998)
DNA (1095bp) protein (365aa)
glycosyl transferase; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-]
Glycosyl transferase, family 4, conserved region-containing protein id=4364276 bin=GWF2_Bacteroidetes_29_10 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes rbh
Tax=CG_Bacteroid_01
scnpilot_solids2_trim150_scaffold_132_25
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(27005..29491)
DNA (2487bp) protein (829aa)
capsular exopolysaccharide family (EC:2.7.10.2)
Capsular exopolysaccharide family id=4344119 bin=GWF2_Bacteroidetes_35_48 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_132_26
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(29481..30296)
DNA (816bp) protein (272aa)
Polysaccharide biosynthesis/export protein id=3485849 bin=GWF2_Bacteroidetes_40_13 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
polysaccharide export protein; K01991 polysaccharide export outer membrane protein
Tax=BJP_IG2102_Bacteroidetes_40_9
scnpilot_solids2_trim150_scaffold_132_27
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(30330..31529)
DNA (1200bp) protein (400aa)
Glycosyl transferase group 1 id=4307980 bin=GWA2_Bacteroidetes_40_14 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good rbh
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_132_28
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(31533..33413)
DNA (1881bp) protein (627aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI0003471B4B rbh
asparagine synthase rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_132_29
GWA2_Elusimicrobia_62_23_curated, Elusimicrobia, Bacteria

Not on your lists

33508..33798
DNA (291bp) protein (97aa)
Putative uncharacterized protein id=2218153 bin=GWB2_Elusimicrobia_63_16 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_62_23_curated
scnpilot_solids2_trim150_scaffold_132_30
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34149..35123
DNA (975bp) protein (325aa)
Putative uncharacterized protein id=4256387 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
Displaying items 1-30 of 120 in total

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