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scnpilot_solids2_trim150_scaffold_408

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_408_1
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(105..2303)
DNA (2199bp) protein (733aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036CDE88
TonB-dependent receptor {ECO:0000313|EMBL:AKD58081.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_solids2_trim150_scaffold_408_2
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2622..3980
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003768AE1 rbh
NADH dehydrogenase, FAD-containing subunit rbh
NADH dehydrogenase, FAD-containing subunit {ECO:0000313|EMBL:AFD07340.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_408_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3967..5085)
DNA (1119bp) protein (373aa)
beta-ketoacyl synthase; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
Beta-ketoacyl synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAY5_CHIPD
Beta-ketoacyl synthase {ECO:0000313|EMBL:ACU59357.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_408_4
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5082..5501)
DNA (420bp) protein (140aa)
thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JUS0_9BACT
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:ELR71304.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
scnpilot_solids2_trim150_scaffold_408_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5528..5818)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Capnocytophaga cynodegmi RepID=UPI000379A953
Uncharacterized protein {ECO:0000313|EMBL:GAO45642.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_408_6
unknown

Not on your lists

5959..6381
DNA (423bp) protein (141aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_408_7
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6383..7300)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGJ4_RUNSL
hypothetical protein; K07029
Uncharacterized protein {ECO:0000313|EMBL:AEI49097.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_408_8
Blattabacterium sp. (Panesthia angustipennis spadica), Blattabacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7309..8853)
DNA (1545bp) protein (515aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:BAM99482.1}; EC=1.1.5.3 {ECO:0000313|EMBL:BAM99482.1};; TaxID=1229512 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Blattabacteriaceae; Blattabacterium.;" source="Blattabacterium sp. (Panesthia angustipennis spadica) str. BPAA.;"
Glycerol-3-phosphate dehydrogenase n=1 Tax=Blattabacterium sp. (Panesthia angustipennis spadica) str. BPAA RepID=M4ZS23_9FLAO
scnpilot_solids2_trim150_scaffold_408_9
Leptospira interrogans, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8846..10492)
DNA (1647bp) protein (549aa)
alkylglycerone-phosphate synthase; K00803 alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
alkylglycerone-phosphate synthase n=1 Tax=Leptospira interrogans RepID=UPI000346B2D3
FAD binding domain protein {ECO:0000313|EMBL:EMJ38569.1}; TaxID=1193040 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira interrogans str. FPW1039.;"
scnpilot_solids2_trim150_scaffold_408_10
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10662..11234)
DNA (573bp) protein (191aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC id=2821680 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
scnpilot_solids2_trim150_scaffold_408_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

11305..12288
DNA (984bp) protein (328aa)
Putative uncharacterized protein id=3826015 bin=GWF2_Bacteroidetes_33_16 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_408_12
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12235..12957)
DNA (723bp) protein (241aa)
Membrane protein TerC, possibly involved in tellurium resistance n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FXM1_ECHVK
membrane protein TerC
Membrane protein TerC, possibly involved in tellurium resistance {ECO:0000313|EMBL:AGA77405.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_solids2_trim150_scaffold_408_13
unknown

Not on your lists

comp(12967..13437)
DNA (471bp) protein (157aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_408_14
unknown

Not on your lists

13554..13964
DNA (411bp) protein (137aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_408_15
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13971..15254
DNA (1284bp) protein (428aa)
Aminodeoxychorismate synthase component 1 {ECO:0000313|EMBL:KHJ38872.1}; EC=2.6.1.85 {ECO:0000313|EMBL:KHJ38872.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
para-aminobenzoate synthase component I; K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85]
Para-aminobenzoate synthase, component I n=1 Tax=Imtechella halotolerans K1 RepID=I0W7D1_9FLAO
scnpilot_solids2_trim150_scaffold_408_16
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15261..15842)
DNA (582bp) protein (194aa)
membrane protein n=1 Tax=Pontibacter roseus RepID=UPI000374DC53
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
multiple antibiotic resistance (MarC)-like protein; K05595 multiple antibiotic resistance protein
scnpilot_solids2_trim150_scaffold_408_17
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15877..17019)
DNA (1143bp) protein (381aa)
Putative uncharacterized protein id=4573473 bin=GWF2_Bacteroidetes_41_31 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
acyltransferase
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_solids2_trim150_scaffold_408_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(17029..18504)
DNA (1476bp) protein (492aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] rbh
Proline--tRNA ligase n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTY9_LEAB4 rbh
scnpilot_solids2_trim150_scaffold_408_19
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18633..20249
DNA (1617bp) protein (539aa)
Uncharacterized protein id=4151400 bin=GWF2_Bacteroidetes_43_63 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_solids2_trim150_scaffold_408_20
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20286..21764
DNA (1479bp) protein (493aa)
membrane protein involved in aromatic hydrocarbon degradation id=4122575 bin=GWF2_Bacteroidetes_33_38 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_solids2_trim150_scaffold_408_21
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

21868..22851
DNA (984bp) protein (328aa)
Peptidase M23 n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S509_PEDSD rbh
peptidase M23 rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_408_22
Synechococcus sp. JA-3-3Ab, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

22880..23308
DNA (429bp) protein (143aa)
Rieske Fe-S protein n=1 Tax=Rivularia sp. PCC 7116 RepID=K9R6Z5_9CYAN
Rieske Fe-S protein
Iron-sulfur cluster-binding protein, Rieske family {ECO:0000313|EMBL:ABC99341.1}; TaxID=321327 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium; Yellowstone A-Prime).;"
scnpilot_solids2_trim150_scaffold_408_23
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23335..25002
DNA (1668bp) protein (556aa)
SSS sodium solute transporter superfamily n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SCN3_PEDSD
SSS sodium solute transporter superfamily protein; K03307 solute:Na+ symporter, SSS family
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:ADY53877.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_408_24
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

25068..25937
DNA (870bp) protein (290aa)
Tax=CG_Bacteroid_02
scnpilot_solids2_trim150_scaffold_408_25
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26026..27114
DNA (1089bp) protein (363aa)
isochorismate synthase; K02361 isochorismate synthase [EC:5.4.4.2]
Isochorismate synthase n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I9S8S1_9BACE
Isochorismate synthase {ECO:0000313|EMBL:EIY52166.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
scnpilot_solids2_trim150_scaffold_408_26
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(27121..27897)
DNA (777bp) protein (259aa)
Uncharacterized protein id=4436652 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
scnpilot_solids2_trim150_scaffold_408_27
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(27928..29844)
DNA (1917bp) protein (639aa)
Putative uncharacterized protein id=4319802 bin=GWF2_Bacteroidetes_42_66 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_408_28
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29962..30552)
DNA (591bp) protein (197aa)
peroxiredoxin (EC:1.11.1.9); K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L759_SAPGL
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
scnpilot_solids2_trim150_scaffold_408_29
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30627..32483)
DNA (1857bp) protein (619aa)
Putative protease with the C-terminal PDZ domain n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KN26_SOLCM
putative protease with the C-terminal PDZ domain
Putative protease with the C-terminal PDZ domain {ECO:0000313|EMBL:AFD09105.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_408_30
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32549..33244)
DNA (696bp) protein (232aa)
short chain dehydrogenase/reductase family oxidoreductase (EC:1.1.1.-); K00100 [EC:1.1.1.-]
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:ABG59456.1}; EC=1.1.1.- {ECO:0000313|EMBL:ABG59456.1};; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11T08_CYTH3
Displaying items 1-30 of 40 in total

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