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scnpilot_solids2_trim150_scaffold_2008

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2008_1
unknown

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2..187
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2008_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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340..1101
DNA (762bp) protein (254aa)
Putative hydroxyacid oxidoreductase (Fe-S centre) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AG35_AZOBR
ykgE; putative hydroxyacid oxidoreductase (Fe-S centre)
Putative hydroxyacid oxidoreductase (Fe-S centre) {ECO:0000313|EMBL:CCC96570.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
scnpilot_solids2_trim150_scaffold_2008_3
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1098..2510
DNA (1413bp) protein (471aa)
(Fe-S)-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B453B2
(Fe-S)-binding protein {ECO:0000313|EMBL:AIB13121.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
ykgF; putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain
scnpilot_solids2_trim150_scaffold_2008_4
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2507..3127
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11LF2_MESSB
hypothetical protein; K00782 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61773.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_2008_5
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3093..3578)
DNA (486bp) protein (162aa)
Transcriptional regulator, MarR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTE9_9PROT
Transcriptional regulator, MarR family protein {ECO:0000313|EMBL:EDP64092.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_2008_6
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3568..4233)
DNA (666bp) protein (222aa)
glutathione-S-transferase; K01800 maleylacetoacetate isomerase [EC:5.2.1.2]
Putative glutathione-S-transferase n=1 Tax=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) RepID=Q7W9B3_BORPA
Putative glutathione-S-transferase {ECO:0000313|EMBL:CAE37154.1}; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253).;"
scnpilot_solids2_trim150_scaffold_2008_7
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4220..5206)
DNA (987bp) protein (329aa)
Putative fumarylacetoacetate hydrolase {ECO:0000313|EMBL:CBS87766.1}; EC=3.7.1.2 {ECO:0000313|EMBL:CBS87766.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00037F5B2E rbh
putative fumarylacetoacetate hydrolase
scnpilot_solids2_trim150_scaffold_2008_8
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5203..6174)
DNA (972bp) protein (324aa)
hmgA; homogentisate 1,2-dioxygenase (EC:1.13.11.5); K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5] rbh
Dioxygenase n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1A1V2_9NEIS rbh
Dioxygenase {ECO:0000313|EMBL:ERE10600.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans EGD-HP2.;"
scnpilot_solids2_trim150_scaffold_2008_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6314..7372)
DNA (1059bp) protein (353aa)
4-hydroxyphenylpyruvate dioxygenase; K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] rbh
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Oceanimonas smirnovii RepID=UPI000367DA34 rbh
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
scnpilot_solids2_trim150_scaffold_2008_10
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7482..8345)
DNA (864bp) protein (288aa)
Cu resistance protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T834_ALCXX
Cu resistance protein {ECO:0000313|EMBL:EGP43526.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
hypothetical protein; K07245 putative copper resistance protein D
scnpilot_solids2_trim150_scaffold_2008_11
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8342..8704)
DNA (363bp) protein (121aa)
Copper resistance protein CopC n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1T8S6_BURSG
copper resistance protein CopC; K07156
Copper resistance protein CopC {ECO:0000313|EMBL:ADN58846.1}; Flags: Precursor;; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1003).;"
scnpilot_solids2_trim150_scaffold_2008_12
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8814..9857)
DNA (1044bp) protein (348aa)
Taurine catabolism dioxygenase TauD/TfdA n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQL7_PARL1 rbh
taurine catabolism dioxygenase TauD/TfdA rbh
Taurine catabolism dioxygenase TauD/TfdA {ECO:0000313|EMBL:ABS62200.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_2008_13
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9870..11597)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=3 Tax=Bordetella bronchiseptica RepID=K0MS07_BORBM rbh
hypothetical protein rbh
D-aminoacylase, C-terminal domain protein {ECO:0000313|EMBL:KDD53139.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
scnpilot_solids2_trim150_scaffold_2008_14
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11803..13215
DNA (1413bp) protein (471aa)
histidine kinase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3713D
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:ABN78914.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;"
scnpilot_solids2_trim150_scaffold_2008_15
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13225..14001)
DNA (777bp) protein (259aa)
Alpha/beta hydrolase fold n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQL2_PARL1 rbh
alpha/beta hydrolase fold protein rbh
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABS62195.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_2008_16
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14013..15272)
DNA (1260bp) protein (420aa)
Luciferase family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQL3_PARL1 rbh
Oxidoreductase {ECO:0000313|EMBL:ETR77905.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
luciferase family protein rbh
scnpilot_solids2_trim150_scaffold_2008_17
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15447..16619)
DNA (1173bp) protein (391aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ETR76106.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ETR76106.1};; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Putative acetyl-CoA acetyltransferase with thiolase domain n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ES61_BRASB rbh
scnpilot_solids2_trim150_scaffold_2008_18
Latrodectus hesperus, Latrodectus, Araneae, Arachnida, Arthropoda, Metazoa

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comp(16755..17948)
DNA (1194bp) protein (398aa)
Pyriform spidroin 1 (Fragment) n=2 Tax=Latrodectus hesperus RepID=C7T5D2_LATHE
Pyriform spidroin 1 {ECO:0000313|EMBL:ACV41934.1}; Flags: Fragment;; TaxID=256737 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Araneoidea; Theridiidae; Latrodectus.;" source="Latrodectus hesperus (Western black widow spider).;"
hypothetical protein
Displaying 18 items

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