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scnpilot_solids2_trim150_scaffold_1327

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1327_1
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1619)
DNA (1617bp) protein (539aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
aspartyl-tRNA synthetase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D4FA01
AspS protein {ECO:0000313|EMBL:BAQ44802.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
scnpilot_solids2_trim150_scaffold_1327_2
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1788..3581
DNA (1794bp) protein (598aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JDC8_9PSED
Nucleotide pyrophosphatase {ECO:0000313|EMBL:KIZ51268.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;"
type I phosphodiesterase/nucleotide pyrophosphatase
scnpilot_solids2_trim150_scaffold_1327_3
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3675..4826
DNA (1152bp) protein (384aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
rnd; ribonuclease D; K03684 ribonuclease D [EC:3.1.13.5]
Ribonuclease D n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HGM7_9PROT rbh
scnpilot_solids2_trim150_scaffold_1327_4
unknown

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comp(4855..5529)
DNA (675bp) protein (225aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1327_5
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(5631..6422)
DNA (792bp) protein (264aa)
Regulatory protein LuxR n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IRV5_9BACT
LuxR family transcriptional regulator {ECO:0000313|EMBL:AHF91779.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
LuxR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1327_6
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6491..7618)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0E9R6_CAUCE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ78122.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
scnpilot_solids2_trim150_scaffold_1327_7
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7705..8457)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000381E179
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
putative transcriptional regulator; K06024 segregation and condensation protein B
scnpilot_solids2_trim150_scaffold_1327_8
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8454..9266)
DNA (813bp) protein (271aa)
Condensin subunit ScpA n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11HC2_MESSB
Segregation and condensation protein A {ECO:0000313|EMBL:CDO61222.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
condensin subunit ScpA; K05896 segregation and condensation protein A
scnpilot_solids2_trim150_scaffold_1327_9
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9263..10273)
DNA (1011bp) protein (337aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52); K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Beta-N-acetylhexosaminidase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VIU6_CAUST
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
scnpilot_solids2_trim150_scaffold_1327_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10288..11211)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI00037A2F88
sporulation domain-containing protein
Sporulation domain-containing protein {ECO:0000313|EMBL:EKE75617.1}; Flags: Fragment;; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
scnpilot_solids2_trim150_scaffold_1327_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11287..12471)
DNA (1185bp) protein (395aa)
putative deoxyguanosinetriphosphate triphosphohydrolase; K01129 dGTPase [EC:3.1.5.1]
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=DGTL1_PARL1
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000255|HAMAP-Rule:MF_01212}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_1327_12
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12536..12877
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EJW9_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ36463.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
scnpilot_solids2_trim150_scaffold_1327_13
unknown

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comp(13034..13492)
DNA (459bp) protein (153aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1327_14
unknown

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comp(13766..13963)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1327_15
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13967..14371)
DNA (405bp) protein (135aa)
methylmalonyl-CoA epimerase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:ABS69837.1}; EC=5.1.99.1 {ECO:0000313|EMBL:ABS69837.1};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Methylmalonyl-CoA epimerase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IP91_XANP2
scnpilot_solids2_trim150_scaffold_1327_16
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14433..16088)
DNA (1656bp) protein (552aa)
Beta-lactamase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HY34_PARL1 rbh
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:GAK44554.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
beta-lactamase domain-containing protein; K07021 rbh
scnpilot_solids2_trim150_scaffold_1327_17
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16088..16930)
DNA (843bp) protein (281aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
pantothenate kinase (EC:2.7.1.33); K03525 type III pantothenate kinase [EC:2.7.1.33] rbh
pantothenate kinase n=1 Tax=Novispirillum itersonii RepID=UPI0003732E41 rbh
Displaying 17 items

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