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scnpilot_solids2_trim150_scaffold_1700

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1700_1
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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148..624
DNA (477bp) protein (159aa)
Single-stranded DNA-binding protein n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0ANG1_MARMM
single-strand binding protein; K03111 single-strand DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; Flags: Precursor;; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis maris (strain MCS10).;"
scnpilot_solids2_trim150_scaffold_1700_2
unknown

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646..1272
DNA (627bp) protein (209aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1700_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1408..4128
DNA (2721bp) protein (907aa)
DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
DNA gyrase subunit A n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030CA909
scnpilot_solids2_trim150_scaffold_1700_4
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4128..4676
DNA (549bp) protein (183aa)
coaD; pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=272942 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 /
Phosphopantetheine adenylyltransferase n=7 Tax=Rhodobacter capsulatus RepID=D5ATM3_RHOCB
scnpilot_solids2_trim150_scaffold_1700_5
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4678..5163
DNA (486bp) protein (162aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YHY5_MOBAS
ppiB; peptidyl prolyl cis-trans isomerase (rotamase B)
scnpilot_solids2_trim150_scaffold_1700_6
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5256..6380
DNA (1125bp) protein (375aa)
Putative aminotransferase DegT/DnrJ/EryC1/StrS family protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQ93_PHAMO
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:EPY01736.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
aminotransferase
scnpilot_solids2_trim150_scaffold_1700_7
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6402..7457
DNA (1056bp) protein (352aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IE73_METNO
scnpilot_solids2_trim150_scaffold_1700_8
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7454..8590
DNA (1137bp) protein (379aa)
tgt; queuine tRNA-ribosyltransferase; K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] rbh
queuine tRNA-ribosyltransferase n=1 Tax=Wenxinia marina RepID=UPI00035DCFC9 rbh
Tax=BJP_08E140C01_Roseovarius_63_250
scnpilot_solids2_trim150_scaffold_1700_trna_1
unknown

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8689..8760
DNA (72bp)
transferRNA Lys
scnpilot_solids2_trim150_scaffold_1700_9
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9101..9739
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000368BAE4
TetR family transcriptional regulator {ECO:0000313|EMBL:EZQ13333.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
regulatory protein, TetR family
scnpilot_solids2_trim150_scaffold_1700_10
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9736..10101
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D7N3_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KJC38576.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1700_11
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10149..10592
DNA (444bp) protein (148aa)
ATPase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036DFF29
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ABR63927.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
scnpilot_solids2_trim150_scaffold_1700_12
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10761..13142)
DNA (2382bp) protein (794aa)
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] rbh
Lon protease {ECO:0000255|HAMAP-Rule:MF_01973}; EC=3.4.21.53 {ECO:0000255|HAMAP-Rule:MF_01973};; ATP-dependent protease La {ECO:0000255|HAMAP-Rule:MF_01973}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
Lon protease n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=LON_METSB rbh
scnpilot_solids2_trim150_scaffold_1700_13
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13135..13551)
DNA (417bp) protein (139aa)
Molecular chaperone (Small heat shock protein)-like protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I7J9_RHOVT
molecular chaperone (small heat shock protein)-like protein
Heat-shock protein Hsp20 {ECO:0000313|EMBL:KAI95603.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
Displaying 14 items

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