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scnpilot_solids2_trim150_scaffold_376

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_376_1
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1050
DNA (1050bp) protein (350aa)
Putative monooxygenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCQ6_PHEZH
monooxygenase
Putative monooxygenase {ECO:0000313|EMBL:ACG78243.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids2_trim150_scaffold_376_2
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1115..2371
DNA (1257bp) protein (419aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Caulobacter sp. AP07 RepID=J2FW70_9CAUL rbh
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:EJL21435.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
beta-lactamase
scnpilot_solids2_trim150_scaffold_376_3
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2401..3648
DNA (1248bp) protein (416aa)
Monooxygenase FAD-binding n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ09_PARL1 rbh
FAD-binding monooxygenase rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids2_trim150_scaffold_376_4
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3645..4019
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ08_PARL1
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids2_trim150_scaffold_376_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4016..5089
DNA (1074bp) protein (358aa)
Aminoglycoside phosphotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ07_PARL1 rbh
aminoglycoside phosphotransferase rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABS61990.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_376_6
Hyphomonas sp. T16B2, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5096..5569)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003783E7A
Uncharacterized protein {ECO:0000313|EMBL:KCZ47535.1}; TaxID=1280941 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. T16B2.;"
Protein of unknown function (DUF3237)
scnpilot_solids2_trim150_scaffold_376_7
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5583..6827)
DNA (1245bp) protein (415aa)
oxidoreductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAC26 rbh
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids2_trim150_scaffold_376_8
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6851..7954)
DNA (1104bp) protein (368aa)
12-oxophytodienoate reductase 2 (EC:1.3.1.42)
NADH:flavin oxidoreductase n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7D254_9ALTE
NADH:flavin oxidoreductase {ECO:0000313|EMBL:EMP54828.1}; TaxID=1288826 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter santoriniensis NKSG1.;"
scnpilot_solids2_trim150_scaffold_376_9
Hyphomonas sp. T16B2, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8120..10324)
DNA (2205bp) protein (735aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPL3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KCZ47951.1}; TaxID=1280941 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. T16B2.;"
TonB-dependent receptor
scnpilot_solids2_trim150_scaffold_376_10
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10709..12934
DNA (2226bp) protein (742aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPL3_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:KGB53228.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
TonB-dependent receptor
scnpilot_solids2_trim150_scaffold_376_11
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13122..14360
DNA (1239bp) protein (413aa)
oxidoreductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAC26
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids2_trim150_scaffold_376_12
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14495..15079
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Spongiibacter tropicus RepID=UPI0003B471E3
MarR family transcriptional regulator {ECO:0000313|EMBL:KCZ88851.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS-2.;"
MarR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_376_13
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15110..15589)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BEU9_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK58645.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_376_14
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15590..15754)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QVC2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG63728.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
scnpilot_solids2_trim150_scaffold_376_15
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15779..16747)
DNA (969bp) protein (323aa)
Cbb3-type cytochrome oxidase, cytochrome c subunit n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BDS4_9RHIZ
Cbb3-type cytochrome oxidase, cytochrome c subunit
Cbb3-type cytochrome oxidase, cytochrome c subunit {ECO:0000313|EMBL:AGK58646.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_376_16
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16744..18234)
DNA (1491bp) protein (497aa)
Cbb3-type cytochrome oxidase subunit 1 n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B8Q1_9RHIZ
Cbb3-type cytochrome oxidase subunit 1
Cbb3-type cytochrome oxidase subunit 1 {ECO:0000313|EMBL:AGK58647.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_376_17
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18347..19549)
DNA (1203bp) protein (401aa)
Acyl-CoA dehydrogenase family protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDZ8_PHEZH rbh
acyl-CoA dehydrogenase rbh
Acyl-CoA dehydrogenase family protein {ECO:0000313|EMBL:ACG78431.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
scnpilot_solids2_trim150_scaffold_376_18
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19788..20699
DNA (912bp) protein (304aa)
gluconolactonase; K01053 gluconolactonase [EC:3.1.1.17] rbh
Antibiotic induced protein, Drp35 n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6ED66_9SPHN rbh
Antibiotic induced protein, Drp35 {ECO:0000313|EMBL:EHJ60778.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
scnpilot_solids2_trim150_scaffold_376_19
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20802..23072)
DNA (2271bp) protein (757aa)
Putative TonB-dependent receptor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNB1_9SPHN rbh
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAD50037.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
TonB-dependent receptor rbh
scnpilot_solids2_trim150_scaffold_376_20
Mycobacterium thermoresistibile, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23157..25685)
DNA (2529bp) protein (843aa)
hypothetical protein; K01007 pyruvate, water dikinase [EC:2.7.9.2] rbh
Phosphoenolpyruvate synthase n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CEQ0_MYCTH rbh
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:EHI13542.1}; TaxID=1078020 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium thermoresistibile ATCC 19527.;"
scnpilot_solids2_trim150_scaffold_376_21
Mycobacterium vanbaalenii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25700..26701)
DNA (1002bp) protein (334aa)
Aminoglycoside phosphotransferase n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1TAH1_MYCVP
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABM14171.1}; TaxID=350058 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1).;"
scnpilot_solids2_trim150_scaffold_376_22
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26957..27673)
DNA (717bp) protein (239aa)
Putative HTH-type transcriptional regulator TcmR n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MEQ8_9ACTO
Putative HTH-type transcriptional regulator TcmR {ECO:0000313|EMBL:EPJ34906.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_376_23
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27894..28319)
DNA (426bp) protein (142aa)
Osmotically inducible membrane protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZH15_AZOL4
Peroxiredoxin {ECO:0000313|EMBL:KJR63581.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
osmC; osmotically inducible membrane protein; K04063 osmotically inducible protein OsmC
scnpilot_solids2_trim150_scaffold_376_24
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28413..28886)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7FQC2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ERP87769.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
putative LysR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_376_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29537..30454)
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CR23_VARPS rbh
LysR family transcriptional regulator; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS19868.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
scnpilot_solids2_trim150_scaffold_376_26
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30594..31877
DNA (1284bp) protein (428aa)
Major facilitator superfamily MFS_1 n=1 Tax=Burkholderia sp. RPE64 RepID=R4WUJ8_9BURK rbh
major facilitator superfamily MFS_1 rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:BAN28238.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;"
scnpilot_solids2_trim150_scaffold_376_27
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31874..32359
DNA (486bp) protein (162aa)
GCN5-related N-acetyltransferase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TR03_TISMK
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AFK55191.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
scnpilot_solids2_trim150_scaffold_376_28
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32356..32823
DNA (468bp) protein (156aa)
Thioesterase superfamily protein n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CGQ9_ALCDB
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:AFT70766.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
scnpilot_solids2_trim150_scaffold_376_29
unknown

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32827..32919
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_376_30
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33143..34060
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=2 Tax=Afipia RepID=D6V0W2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30469.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
transcriptional regulator rbh
Displaying items 1-30 of 65 in total

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