ggKbase home page

scnpilot_solids2_trim150_scaffold_1285_6

Organism: SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(4570..5310)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00038065D7 similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 220.0
  • Bit_score: 217
  • Evalue 2.10e-53
TetR family transcriptional regulator {ECO:0000313|EMBL:KDA01014.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas oceanitis SCH89.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 225.0
  • Bit_score: 223
  • Evalue 3.20e-55
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 227.0
  • Bit_score: 201
  • Evalue 2.20e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hyphomonas oceanitis → Hyphomonas → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGGCTCGAAAACCGCCGCCGCGGCGCAGCGCGAAAAAGCCGGTCGAAAAAACCGGCCAGCGTGAGCGCGCCAAAAACGAACGGCGCTTGCGCATCATGGCGGCGGCGCGTGATCTGATCCGCGAGACCGGCGAAACCCAGCTTTCGATGCGGACCATTGCCAAGCGCGCCAATGTCAGCCTGGCGACGCCGTACAATCTGTTCGGTTCCAAACGCGCCGTGGTGATGGCGATTCTGGAGGACGTGCGCAACTTCTCGGAGCATGTTGCCGGGCTGGAGCAACTGAGCGCCATCGAACGGATTTTTTCCGCGCTGGCGCTTGCCACCGATTTTTACCGTGACGATCCGCTTTTTTACCGCACGTTGTGGAAGGCCCTGCTGGATACCAGCGGCAAGGGCACCGAACACACCATGTTCACGCCGCAAGGACGGGCCAGAAATCACGCGTTGTGGGAAGGCCTGTTGCAGGATGCGCAAGACGAAGGGACAGTGGCGGACGAAGCCAATCTCGAAAGCCTGCTGAAGAACCTGTCCCACACCTTCAACGGCGTGATGCTGGGCTGGGTGATCGGCGAAGTGAAATCCGCCGACCTGCCGAACGCCATCGCCTATGCCTATGCGCTCGCCTTGCGCGGGGTGGCCACGCCAAAGGGGGCGGCACTGCTTCTGAAGCGGATTCAACTGTATCAAACCGCCCTGACGCAGAAGCCGGCGGCCCGCCGCGGCAAGCGTGCAAACTGA
PROTEIN sequence
Length: 247
MARKPPPRRSAKKPVEKTGQRERAKNERRLRIMAAARDLIRETGETQLSMRTIAKRANVSLATPYNLFGSKRAVVMAILEDVRNFSEHVAGLEQLSAIERIFSALALATDFYRDDPLFYRTLWKALLDTSGKGTEHTMFTPQGRARNHALWEGLLQDAQDEGTVADEANLESLLKNLSHTFNGVMLGWVIGEVKSADLPNAIAYAYALALRGVATPKGAALLLKRIQLYQTALTQKPAARRGKRAN*