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scnpilot_solids2_trim150_scaffold_1285

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1285_1
unknown

Not on your lists

1..276
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1285_2
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(280..675)
DNA (396bp) protein (132aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase [EC:4.4.1.5]
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0AKN7_MARMM
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABI67156.1}; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis maris (strain MCS10).;"
scnpilot_solids2_trim150_scaffold_1285_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(723..1568)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI0003650A4D
putative dioxygenase
Putative Dioxygenase {ECO:0000313|EMBL:CBK40689.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
scnpilot_solids2_trim150_scaffold_1285_4
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1746..3449
DNA (1704bp) protein (568aa)
AMP-dependent synthetase and ligase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A5K7_THECD rbh
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:KID29881.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
AMP-dependent synthetase and ligase rbh
scnpilot_solids2_trim150_scaffold_1285_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3478..4551
DNA (1074bp) protein (358aa)
Aminoglycoside phosphotransferase id=4374047 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fadE36; aminoglycoside phosphotransferase; K06979
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids2_trim150_scaffold_1285_6
Hyphomonas oceanitis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4570..5310)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00038065D7
TetR family transcriptional regulator {ECO:0000313|EMBL:KDA01014.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas oceanitis SCH89.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1285_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5496..6845)
DNA (1350bp) protein (450aa)
Acyl-CoA dehydrogenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDE2_PHEZH rbh
acyl-CoA dehydrogenase rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids2_trim150_scaffold_1285_8
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6857..7243)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXP9_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS64682.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_1285_9
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7247..7528)
DNA (282bp) protein (94aa)
Aminoglycoside phosphotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXQ0_PARL1
Uncharacterized protein {ECO:0000313|EMBL:CDO61145.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
aminoglycoside phosphotransferase; K06979
scnpilot_solids2_trim150_scaffold_1285_10
unknown

Not on your lists

7588..8121
DNA (534bp) protein (178aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1285_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8137..8997)
DNA (861bp) protein (287aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9F4_PHEZH rbh
enoyl-CoA hydratase/isomerase rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids2_trim150_scaffold_1285_12
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9193..11853)
DNA (2661bp) protein (887aa)
TonB-dependent receptor n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EZ99_SPHCR
TonB-dependent receptor
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids2_trim150_scaffold_1285_13
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12505..13467
DNA (963bp) protein (321aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EQK7_METSB rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACK52220.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
scnpilot_solids2_trim150_scaffold_1285_14
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13513..14262
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NNI0_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF40955.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
putative DUF81 family protein rbh
scnpilot_solids2_trim150_scaffold_1285_15
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14408..15817
DNA (1410bp) protein (470aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G8Q1_CHLAD
Uncharacterized protein {ECO:0000313|EMBL:KJS27262.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c29.;"
sugar (glycoside-Pentoside-Hexuronide) transporter; K03292 glycoside/pentoside/hexuronide:cation symporter, GPH family
scnpilot_solids2_trim150_scaffold_1285_16
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15814..17241
DNA (1428bp) protein (476aa)
L-fuculokinase protein {ECO:0000313|EMBL:EZP38311.1}; EC=2.7.1.51 {ECO:0000313|EMBL:EZP38311.1};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003625CAF
sugar kinase
scnpilot_solids2_trim150_scaffold_1285_17
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17228..18445
DNA (1218bp) protein (406aa)
peptidase M19 renal dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19]
Uncharacterized protein n=1 Tax=Ralstonia sp. AU12-08 RepID=S9TM92_9RALS
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids2_trim150_scaffold_1285_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18442..19599
DNA (1158bp) protein (386aa)
Lactate dehydrogenase {ECO:0000313|EMBL:AJP70889.1}; EC=1.1.2.3 {ECO:0000313|EMBL:AJP70889.1};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
lldD; L-lactate dehydrogenase (cytochrome) (EC:1.1.2.3); K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
PREDICTED: peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C198F1 rbh
scnpilot_solids2_trim150_scaffold_1285_19
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19800..21908
DNA (2109bp) protein (703aa)
Short chain dehydrogenase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZCY0_9GAMM rbh
Short chain dehydrogenase {ECO:0000313|EMBL:EIT69749.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
short chain dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_1285_20
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21936..23234
DNA (1299bp) protein (433aa)
Xylose isomerase-like TIM barrel n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T7L6_9GAMM rbh
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:EIT69748.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
L-rhamnose isomerase
scnpilot_solids2_trim150_scaffold_1285_21
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23239..25347
DNA (2109bp) protein (703aa)
Alpha-L-rhamnosidase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7T8_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KJS27259.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c29.;"
alpha-L-rhamnosidase
Displaying 21 items

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