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scnpilot_solids2_trim150_scaffold_1285_20

Organism: SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 21936..23234

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase-like TIM barrel n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T7L6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 427.0
  • Bit_score: 553
  • Evalue 1.70e-154
  • rbh
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:EIT69748.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 427.0
  • Bit_score: 553
  • Evalue 2.40e-154
L-rhamnose isomerase similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 429.0
  • Bit_score: 550
  • Evalue 4.50e-154

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Taxonomy

Hydrocarboniphaga effusa → Hydrocarboniphaga → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
ATGCCGTTTTCGAGAATTTCCTCCGATCTGATCGGCTCCGAAAACGCCACGCGGCTTGCCGCGCTGCAGGAAGATTATGAATTCCTGGGGCGCAAGCTGGCGCGGCGCGGGCTCTCCATCGATCGCATAAAGGAACGTGTGAAGGCGTTCACCGTCGCAATTCCGTCCTGGGGCGTGGGCGCCGGCGGCACCCGGTTTGCCCGCTTTCCCCTCGCCGGCGAGCCGCGCTCGGTTTGGGAAAAGCTTGAAGATTGTTCCGTCGTGCAGGATCTGGGGCGGAATACGCCCTGCATATCGATCCATTTTCCGTGGGACTGGACGGACGATCTGAAGGGGCTCCGGCAGGCGGCGGTGCAATTGGGGCTTCATTTCGGCCCCGTCAATTCGAACACGTTTCAGGACAGGCCGGGCGCAGAGCTGTCGTACAAATATGGCAGCCTGACGCACACGGACCGGCATGTTCAGGAACAGGCCATCGCGCACAATCGCGCCTGTATTGAAGGTGGTGTCGCGCTGGGTTCAAAAGCGCTGACGGTATGGATCGGGGATGGGACCAATTTTCCGGGCCAGCAGGATTTCACCGCAAGCTTCGATCGCTATCTTGAAAGTGCGGAGAAAATTTACGCGGCGCTGCCCGGCGACTGGACGCTTCTGATCGAACACAAACTCTACGAACCGGCGTTTTATTCCACGGTGATACAGGATTGGGGCACCAGCTATATTGCTGCCACACATCTTGGCGACCGGGCGAAATGCCTTGTCGACCTCGGCCATCACGCGCCCACCGTCAATATCGAGATGATCGTGGCGCGGCTTGCCCGTTTCGGAAAGCTGGGCGGGTTTCACTTCAACGATTCGAAATATGGCGACGACGATCTTGATGCCGGGTCGATCGATCCATTCCGTCTGTTCCTGATCTTCAACGAATTGGTGGAAGCGGATCTGCGCGGCAGCGGCGTGGCTTCGCTGGAGCATATGATCGATCAGTCACACAATGCGACCGACCCGATCGAGAGCCTTCTCTTGAGCGCCGAAGCGATCGCCGGTGCCTATGCCCGCGCGCTGATCGTGGATCGCGACACCTTGCACGGTGCGCAGGCCGGAAACGATGTCATCATGGCGCGGGAACAGTTGCGAACCGCATACGAAACGCCGATGGGGCCGGTTCTGGCCATGGCGCGTTATGAGAGCGGCGGCGCCATCGATCCGGTCGCGGTTTTTCGCGTGTCGGGCTATCGTGAAGACCGCGCCCGCGATCGGCCCGCCGAGGGTGGTGCGACAAGCGCAGGAATTGTGTGA
PROTEIN sequence
Length: 433
MPFSRISSDLIGSENATRLAALQEDYEFLGRKLARRGLSIDRIKERVKAFTVAIPSWGVGAGGTRFARFPLAGEPRSVWEKLEDCSVVQDLGRNTPCISIHFPWDWTDDLKGLRQAAVQLGLHFGPVNSNTFQDRPGAELSYKYGSLTHTDRHVQEQAIAHNRACIEGGVALGSKALTVWIGDGTNFPGQQDFTASFDRYLESAEKIYAALPGDWTLLIEHKLYEPAFYSTVIQDWGTSYIAATHLGDRAKCLVDLGHHAPTVNIEMIVARLARFGKLGGFHFNDSKYGDDDLDAGSIDPFRLFLIFNELVEADLRGSGVASLEHMIDQSHNATDPIESLLLSAEAIAGAYARALIVDRDTLHGAQAGNDVIMAREQLRTAYETPMGPVLAMARYESGGAIDPVAVFRVSGYREDRARDRPAEGGATSAGIV*