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scnpilot_solids2_trim150_scaffold_487_20

Organism: SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(23554..25080)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 factor interaction domain-containing protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IX08_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 495.0
  • Bit_score: 606
  • Evalue 2.60e-170
Response regulatory protein {ECO:0000313|EMBL:CDO58957.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 501.0
  • Bit_score: 635
  • Evalue 5.60e-179
Sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 495.0
  • Bit_score: 606
  • Evalue 8.10e-171

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1527
ATGCGCCACAACACAACAGAGGAAAAGATGGCGCAGACGATCCTCATCGTCGACGACGATCCGGTTCAACGCAGGCTTCTGGAAGCGGCGATCAGCAAGGCAGGCATGGCGGCGGTAACCGCGCCGGGCGGCGGGCCTGCGCTCGACCTGCTGCATGGGCCGCGGGGAGAGCAGATTGCGCTTGTCCTGCTGGATCTGGTGATGCCCGATGTCGACGGCATCACGGTACTGACGCGGTTGCGCGCGGCGCACAACGAATTGCCGGTGATCGTACTGACGGCCAAGGGCGGCATCGATTCCGCGGTGGAGGCGATGCGGGCCGGCGCCAACGATTTTCTGGTCAAACCGGCGAACCCGGAACGCATCACCGTTTCGATCCGCAACGCGCTCAAGATCGGCACCCTGTCAGGCGAAGTAACGCGGCTGAAGAAACGCAACGACAACCGGCTTCTGTTCGACGATCTGGTGGCACGCAGTTCCGAGATGCGCCAGGTGTTCCGGCTGGGCACGCGCGCGGCGCAATCGAACATCCCGATCCTGATCGAAGGCGAATCCGGCGTCGGCAAGGAATTGATCGCGCGCGCGATCCAGGGCGGATCGGAACGCGCCGGCAAGCCGTTCATCACCGTCAATTGCGGCGCAATACCGGAAAACCTGGTCGAATCCATTCTGTTCGGCCACGAGAAAGGCGCCTTCACCGGCGCCACGGAACGCCATCTCGGCAAGTTTCAGGAAGCCCATGGCGGCACACTGTTCCTGGATGAGATCGGGGAACTGCGCCTCGACATGCAGGTGAAACTGCTGCGCGCGCTGCAGGAAGGCGAGGTCGACCCGGTGGGTGCCAAGCGGCCGGTCAAGGTGGATGTGCGCATCATTTCCGCCACCAATCGCGATCTGGCCGAACTGACCCGCGAAGGCAGCTTCCGCGAGGACCTTTATTACCGGCTGAACGTGTTTCCGATCTTCGTGCCGCCCCTGCGCCAGCGCCGCGAGGACATTGCGGCCCTGACCCGCCACTTCATCGCCCGCTTCGCGGCAGAGGAGAACAAGCCGGTTTCGGGCCTGACGCCGGAAGCCGCAGAACTTCTGGAGAATTACGACTGGCCGGGCAATGTGCGCCAGCTTGAGAACACCGTGTTCCGGGCCGTGGTGCTGTGCGACGGCATGATGCTGGACGTGTGCGATTTTCCGCAGATCGCGGCGGCCATGGGCGTCAACCCGGCGCCGCGCCGGCAGATCATCACACCGGCCAAGGCGAGCGAGGGGGGCTATGCGCCGCAAGCCTTCGGGCAGGCCGCGATGCCATCGCCCTATGCGCTGTCGGCGATCGACGCCGCGGGCCATATGCGCAAGCTGGAAGAAGTGGAATCGGAGATCATCCGTCTCGCGATTTCCCGCTATGACGGCCACATGTCGGAAGTGGCGCGCAGGCTGGGGATCGGGCGTTCAACGCTTTACCGCAAGCTGAAGGAACTGGGGCTGGAAGAAACGGATGCCGGAGACGAATCGCTGAAAGCCGCAGGCTGA
PROTEIN sequence
Length: 509
MRHNTTEEKMAQTILIVDDDPVQRRLLEAAISKAGMAAVTAPGGGPALDLLHGPRGEQIALVLLDLVMPDVDGITVLTRLRAAHNELPVIVLTAKGGIDSAVEAMRAGANDFLVKPANPERITVSIRNALKIGTLSGEVTRLKKRNDNRLLFDDLVARSSEMRQVFRLGTRAAQSNIPILIEGESGVGKELIARAIQGGSERAGKPFITVNCGAIPENLVESILFGHEKGAFTGATERHLGKFQEAHGGTLFLDEIGELRLDMQVKLLRALQEGEVDPVGAKRPVKVDVRIISATNRDLAELTREGSFREDLYYRLNVFPIFVPPLRQRREDIAALTRHFIARFAAEENKPVSGLTPEAAELLENYDWPGNVRQLENTVFRAVVLCDGMMLDVCDFPQIAAAMGVNPAPRRQIITPAKASEGGYAPQAFGQAAMPSPYALSAIDAAGHMRKLEEVESEIIRLAISRYDGHMSEVARRLGIGRSTLYRKLKELGLEETDAGDESLKAAG*