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scnpilot_solids2_trim150_scaffold_720

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_720_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3..905)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E339_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN11905.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
scnpilot_solids2_trim150_scaffold_720_2
unknown

Not on your lists

comp(908..1519)
DNA (612bp) protein (204aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_720_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1516..3963)
DNA (2448bp) protein (816aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFG1_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB53754.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_720_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4024..4506)
DNA (483bp) protein (161aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8S1_BIFAD
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:EDN82136.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_720_5
unknown

Not on your lists

comp(4557..5129)
DNA (573bp) protein (191aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_720_6
unknown

Not on your lists

comp(5160..5360)
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_720_7
unknown

Not on your lists

comp(5429..5539)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_720_8
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(5978..6571)
DNA (594bp) protein (198aa)
AlphaRep-4 n=1 Tax=synthetic construct RepID=UPI0001E5ECAD
HEAT repeat-containing protein
HEAT repeat protein {ECO:0000313|EMBL:AEP11370.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
scnpilot_solids2_trim150_scaffold_720_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6616..11472)
DNA (4857bp) protein (1619aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EC54_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EHN08747.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Rhs family protein rbh
scnpilot_solids2_trim150_scaffold_720_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(11878..12246)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7V2_CONWI
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
scnpilot_solids2_trim150_scaffold_720_11
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12288..12569)
DNA (282bp) protein (94aa)
Prevent-host-death protein, antitoxin of TAS system n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKB6_BLASD
prevent-host-death protein, antitoxin of TAS system
Prevent-host-death protein, antitoxin of TAS system {ECO:0000313|EMBL:CCG01139.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
scnpilot_solids2_trim150_scaffold_720_12
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12779..13465)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DLV5_DESVM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL08481.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
scnpilot_solids2_trim150_scaffold_720_13
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13462..13989)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B63958
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
scnpilot_solids2_trim150_scaffold_720_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14064..15308)
DNA (1245bp) protein (415aa)
Type IV fimbrial assembly protein PilC n=1 Tax=Patulibacter medicamentivorans RepID=H0E2Z0_9ACTN rbh
Type IV fimbrial assembly protein PilC {ECO:0000313|EMBL:EHN11959.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
type II secretion system protein; K02653 type IV pilus assembly protein PilC rbh
scnpilot_solids2_trim150_scaffold_720_15
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15312..16412)
DNA (1101bp) protein (367aa)
Pilus retraction ATPase PilT n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWU7_RUBXD rbh
pilus retraction ATPase PilT; K02669 twitching motility protein PilT rbh
Pilus retraction ATPase PilT {ECO:0000313|EMBL:ABG04131.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
scnpilot_solids2_trim150_scaffold_720_16
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16461..18248)
DNA (1788bp) protein (596aa)
Type IV fimbrial assembly ATPase PilB n=1 Tax=Patulibacter medicamentivorans RepID=H0E2Y8_9ACTN rbh
Type IV fimbrial assembly ATPase PilB {ECO:0000313|EMBL:EHN11957.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
type II secretion system protein E; K02652 type IV pilus assembly protein PilB
scnpilot_solids2_trim150_scaffold_720_17
unknown

Not on your lists

comp(18251..18838)
DNA (588bp) protein (196aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_720_18
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18912..20639)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E340_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN11906.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
scnpilot_solids2_trim150_scaffold_720_19
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20702..21817)
DNA (1116bp) protein (372aa)
Twitching motility protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWU5_RUBXD rbh
twitching motility protein; K02669 twitching motility protein PilT rbh
Twitching motility protein {ECO:0000313|EMBL:ABG04133.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
scnpilot_solids2_trim150_scaffold_720_20

Not on your lists

comp(21858..22964)
DNA (1107bp) protein (369aa)
RNA polymerase sigma factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA01_CONWI rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor rbh
scnpilot_solids2_trim150_scaffold_720_21

Not on your lists

23185..24123
DNA (939bp) protein (313aa)
Ribonuclease BN n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2W0_CONWI
Virulence factor BrkB {ECO:0000313|EMBL:AIA11018.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ribonuclease BN
scnpilot_solids2_trim150_scaffold_720_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

24139..24807
DNA (669bp) protein (223aa)
Transcriptional regulator, TetR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDX0_CONWI
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB51586.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_720_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

24804..25475
DNA (672bp) protein (224aa)
Transcriptional regulator, TetR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDW9_CONWI
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB51585.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_720_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(25466..26470)
DNA (1005bp) protein (335aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] rbh
Fructose-1,6-bisphosphatase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA06_CONWI rbh
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_720_25
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26499..27431
DNA (933bp) protein (311aa)
Luciferase-like monooxygenase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AE80_THECD rbh
luciferase-like monooxygenase rbh
Luciferase-like monooxygenase {ECO:0000313|EMBL:ACY99506.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Displaying 25 items

View Taxonomy