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scnpilot_solids2_trim150_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 157 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_46_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135..2309
DNA (2175bp) protein (725aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003636E9C
Uncharacterized protein {ECO:0000313|EMBL:EIL92446.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_46_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2479..2640)
DNA (162bp) protein (54aa)
Xaa-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582}; Short=X-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279};; EC=3.4.13.9 {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582};; Imidodipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; Proline dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; Xaa-Pro dipeptidase; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;
Xaa-Pro dipeptidase (EC:3.4.13.9)
Xaa-Pro dipeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1A3_9GAMM
scnpilot_solids2_trim150_scaffold_46_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2662..3699)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00036844E6
Uncharacterized protein {ECO:0000313|EMBL:AIF45986.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_46_4
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3766..5100)
DNA (1335bp) protein (445aa)
Xaa-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582}; Short=X-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279};; EC=3.4.13.9 {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582};; Imidodipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; Proline dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; Xaa-Pro dipeptidase; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;
Xaa-Pro dipeptidase (EC:3.4.13.9)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382485C
scnpilot_solids2_trim150_scaffold_46_5
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5325..5666)
DNA (342bp) protein (114aa)
pilZ family protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4D380
Pilus biosynthesis protein PilZ {ECO:0000313|EMBL:GAN45387.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
type IV pilus assembly protein PilZ
scnpilot_solids2_trim150_scaffold_46_6

Not on your lists

comp(5663..7891)
DNA (2229bp) protein (743aa)
Protein containing DUF1631 n=2 Tax=mine drainage metagenome RepID=T0Y6S8_9ZZZZ
Protein containing DUF1631 {ECO:0000313|EMBL:EQD27572.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Protein of unknown function (DUF1631)
scnpilot_solids2_trim150_scaffold_46_7
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8003..8185)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Pseudomonas viridiflava UASWS0038 RepID=K6BM83_PSEVI
Uncharacterized protein {ECO:0000313|EMBL:EYR68416.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_46_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8178..9353)
DNA (1176bp) protein (392aa)
HemN family oxidoreductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1A6_9GAMM
HemN family oxidoreductase {ECO:0000313|EMBL:EIL93247.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative oxygen-independent coproporphyrinogen III oxidase
scnpilot_solids2_trim150_scaffold_46_9
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9451..10104)
DNA (654bp) protein (218aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
nucleoside-triphosphate diphosphatase n=1 Tax=Dyella ginsengisoli RepID=UPI000345F11F
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
scnpilot_solids2_trim150_scaffold_46_10
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10101..10826)
DNA (726bp) protein (242aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
RNAse PH (EC:2.7.7.56)
ribonuclease PH n=1 Tax=Dyella japonica RepID=UPI000370E75B
scnpilot_solids2_trim150_scaffold_46_11
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10897..11757
DNA (861bp) protein (287aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN45378.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Putative uncharacterized protein id=2556749 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
hypothetical protein
scnpilot_solids2_trim150_scaffold_46_12
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11754..12395
DNA (642bp) protein (214aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2B9_9GAMM
scnpilot_solids2_trim150_scaffold_46_13
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12451..13290
DNA (840bp) protein (280aa)
ABC-type transport system involved in resistance to organic solvents, ATPase component n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L3U7_FRAAD
Toluene ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAN45376.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ABC-type transport system involved in resistance to organic solvents, ATPase component; K02065 putative ABC transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_46_14
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13287..14054
DNA (768bp) protein (256aa)
ABC transporter permease n=1 Tax=Rudaea cellulosilytica RepID=UPI0003748F65
ABC transporter permease {ECO:0000313|EMBL:GAN45375.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_46_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14075..14596
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036F7BF1
Mammalian cell entry protein {ECO:0000313|EMBL:GAN45374.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ABC-type transport system involved in resistance to organic solvents, periplasmic component
scnpilot_solids2_trim150_scaffold_46_16
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14644..15294
DNA (651bp) protein (217aa)
Organic solvent resistance ABC transporter auxiliary protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRK1_9GAMM
Toluene tolerance protein {ECO:0000313|EMBL:KGI76850.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ABC-type transport system involved in resistance to organic solvents, auxiliary component
scnpilot_solids2_trim150_scaffold_46_17
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15299..15634
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E60685
Uncharacterized protein {ECO:0000313|EMBL:KGI76849.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative NTP binding protein (contains STAS domain)
scnpilot_solids2_trim150_scaffold_46_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15640..16644)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037C0A0E rbh
Surface lipoprotein {ECO:0000313|EMBL:EIL98299.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
surface lipoprotein
scnpilot_solids2_trim150_scaffold_46_19
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16848..17141
DNA (294bp) protein (98aa)
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aur
DNA-directed RNA polymerase subunit omega n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L3V3_FRAAD
scnpilot_solids2_trim150_scaffold_46_20
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17645..19825
DNA (2181bp) protein (727aa)
bifunctional (p)ppGpp synthetase II/ guanosine-3'''',5''''-bis pyrophosphate 3''''-pyrophosphohydrolase n=1 Tax=Dyella japonica RepID=UPI0003171CBA
(P)ppGpp synthetase {ECO:0000313|EMBL:GAN45372.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
(p)ppGpp synthetase, RelA/SpoT family
scnpilot_solids2_trim150_scaffold_46_21
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20017..20403
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B8FAC
translation initiation inhibitor; K07567 TdcF protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids2_trim150_scaffold_46_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20504..22552
DNA (2049bp) protein (683aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Rhodanobacter denitrificans RepID=I4WVX4_9GAMM
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:GAN45370.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
scnpilot_solids2_trim150_scaffold_46_23
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22631..22882
DNA (252bp) protein (84aa)
50S ribosomal protein L31 type B id=2556723 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ribosomal protein L31
scnpilot_solids2_trim150_scaffold_46_24
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23130..24416
DNA (1287bp) protein (429aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
citrate synthase I, hexameric type (EC:2.3.3.1)
type II citrate synthase n=1 Tax=Dyella ginsengisoli RepID=UPI00034CA2B5
scnpilot_solids2_trim150_scaffold_46_25
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24552..25196)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9L1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45828.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_46_26
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25396..27918)
DNA (2523bp) protein (841aa)
penicillin-binding protein 1A n=1 Tax=Dyella ginsengisoli RepID=UPI000349E17D
Penicillin-binding protein {ECO:0000313|EMBL:KJV37346.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
penicillin-binding protein, 1A family
scnpilot_solids2_trim150_scaffold_46_27
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28422..29480
DNA (1059bp) protein (353aa)
fimbrial assembly protein n=1 Tax=Dyella japonica RepID=UPI0002D78188
Pilus assembly protein PilM {ECO:0000313|EMBL:GAN45369.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
type IV pilus assembly protein PilM
scnpilot_solids2_trim150_scaffold_46_28
unknown

Not on your lists

29480..29581
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_46_29
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29581..30387
DNA (807bp) protein (269aa)
Tfp pilus assembly protein PilN n=1 Tax=Rhodanobacter denitrificans RepID=M4NJZ2_9GAMM
Tfp pilus assembly protein PilN
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_46_30
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30384..31049
DNA (666bp) protein (222aa)
Fimbrial assembly membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVW6_9GAMM
Fimbrial protein {ECO:0000313|EMBL:AHX15829.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Tfp pilus assembly protein PilO
Displaying items 1-30 of 157 in total

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