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scnpilot_solids2_trim150_scaffold_209

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_209_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249..2006)
DNA (1758bp) protein (586aa)
Sodium (Na+) symporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLE5_9GAMM
Sodium (Na+) symporter {ECO:0000313|EMBL:EIL88036.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
sodium (Na+) symporter rbh
scnpilot_solids2_trim150_scaffold_209_2
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2180..5173)
DNA (2994bp) protein (998aa)
dmsA2; molybdopterin oxidoreductase Fe4S4 region; K00183 molybdopterin oxidoreductase, molybdopterin binding subunit [EC:1.2.7.-]
formate dehydrogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B33440
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids2_trim150_scaffold_209_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5586..6566
DNA (981bp) protein (327aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLE6_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:AHX15258.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_209_4
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6563..7480
DNA (918bp) protein (306aa)
Putative esterase of the alpha-beta hydrolase superfamily protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUH5_9GAMM
Serine protease {ECO:0000313|EMBL:GAN44941.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative esterase of the alpha-beta hydrolase superfamily
scnpilot_solids2_trim150_scaffold_209_5
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7975..8742)
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WAV8_RALSL
Putative uncharacterized protein {ECO:0000313|EMBL:CCF96929.1}; TaxID=1091042 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum K60-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_209_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9255..11600)
DNA (2346bp) protein (782aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA-dependent helicase II n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAT4_9GAMM
DNA/RNA helicase, superfamily I
scnpilot_solids2_trim150_scaffold_209_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11687..12103
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDC3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97464.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_209_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12156..12377)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003499511
Uncharacterized protein {ECO:0000313|EMBL:GAN44938.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_209_9
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12810..15605)
DNA (2796bp) protein (932aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2V0_9GAMM
DNA polymerase I {ECO:0000313|EMBL:GAN44936.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
scnpilot_solids2_trim150_scaffold_209_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15687..16172
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WQ54_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01596.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids2_trim150_scaffold_209_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16151..16882)
DNA (732bp) protein (244aa)
glutathione S-transferase P subunit (EC:2.5.1.18); K00799 glutathione S-transferase [EC:2.5.1.18] rbh
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E0105B rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
scnpilot_solids2_trim150_scaffold_209_12
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17013..18596)
DNA (1584bp) protein (528aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase n=1 Tax=mine drainage metagenome RepID=T1CGY7_9ZZZZ rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
scnpilot_solids2_trim150_scaffold_209_13
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18613..18903)
DNA (291bp) protein (97aa)
Factor for inversion stimulation Fis, transcriptional activator n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L216_FRAAD
transcriptional activator Fis; K03557 Fis family transcriptional regulator, factor for inversion stimulation protein
Factor for inversion stimulation Fis, transcriptional activator {ECO:0000313|EMBL:AFC87271.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
scnpilot_solids2_trim150_scaffold_209_14
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19197..20606)
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B6037
Uncharacterized protein {ECO:0000313|EMBL:KGI78765.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Protein of unknown function (DUF3426)
scnpilot_solids2_trim150_scaffold_209_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20665..21657)
DNA (993bp) protein (331aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
50S ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
Ribosomal protein L11 methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAU2_9GAMM
scnpilot_solids2_trim150_scaffold_209_16
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21787..23028)
DNA (1242bp) protein (414aa)
Multifunctional CCA protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX52_9GAMM
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
tRNA nucleotidyltransferase/poly(A) polymerase
scnpilot_solids2_trim150_scaffold_209_17

Not on your lists

comp(23031..23969)
DNA (939bp) protein (313aa)
NAD-dependent epimerase/dehydratase n=3 Tax=mine drainage metagenome RepID=T0Z4Y4_9ZZZZ rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EQD43091.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative nucleoside-diphosphate sugar epimerase
scnpilot_solids2_trim150_scaffold_209_18
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23966..26044)
DNA (2079bp) protein (693aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034785EA
Lytic transglycosylase {ECO:0000313|EMBL:AHX14852.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
soluble lytic murein transglycosylase-like protein
scnpilot_solids2_trim150_scaffold_209_19
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26157..26771)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C681F
Uncharacterized protein {ECO:0000313|EMBL:GAN45520.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_209_20
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26892..27683)
DNA (792bp) protein (264aa)
Metal-dependent hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W335_9GAMM
Endonuclease {ECO:0000313|EMBL:GAN45519.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
metal-dependent hydrolase
scnpilot_solids2_trim150_scaffold_209_21
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27765..28511)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030726E6
Uncharacterized protein {ECO:0000313|EMBL:KJV31888.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
protein-disulfide isomerase; K03673 thiol:disulfide interchange protein DsbA
scnpilot_solids2_trim150_scaffold_209_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28671..29372)
DNA (702bp) protein (234aa)
Thiol:disulfide interchange protein DsbA n=1 Tax=mine drainage metagenome RepID=T1CS84_9ZZZZ
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
protein-disulfide isomerase
scnpilot_solids2_trim150_scaffold_209_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29454..30263)
DNA (810bp) protein (270aa)
Cytochrome c553 n=1 Tax=Rhodanobacter denitrificans RepID=M4NDB2_9GAMM
cytochrome c553
Cytochrome c553 {ECO:0000313|EMBL:AGG87433.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_209_24
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30345..31004
DNA (660bp) protein (220aa)
Probable GTP-binding protein EngB n=1 Tax=Rhodanobacter denitrificans RepID=I4WS88_9GAMM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
cell division checkpoint GTPase YihA
scnpilot_solids2_trim150_scaffold_209_25
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31175..32539
DNA (1365bp) protein (455aa)
glutamate--cysteine ligase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B49EF7 rbh
Glutamate--cysteine ligase {ECO:0000313|EMBL:GAN45514.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
glutamate--cysteine ligase, plant type
scnpilot_solids2_trim150_scaffold_209_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32609..33784)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHD8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL98879.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_209_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33893..34810)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE06_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97697.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_209_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34848..35876)
DNA (1029bp) protein (343aa)
Asparaginase n=1 Tax=Rhodanobacter denitrificans RepID=M4NNS6_9GAMM
asparaginase
Asparaginase {ECO:0000313|EMBL:AGG89331.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_209_29
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36033..38474
DNA (2442bp) protein (814aa)
Alpha-mannosidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7V2_9GAMM
Alpha-mannosidase {ECO:0000313|EMBL:EIL95543.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_209_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38584..40773)
DNA (2190bp) protein (730aa)
Peptidyl-dipeptidase Dcp n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKZ0_9GAMM
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:EIL87881.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Zn-dependent oligopeptidase
Displaying items 1-30 of 50 in total

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