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scnpilot_solids2_trim150_scaffold_3244

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3244_1
unknown

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3..176
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3244_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(256..1041)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMI2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97779.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3244_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1054..1371)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE87_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97778.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3244_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1569..2549
DNA (981bp) protein (327aa)
Biotin-(Acetyl-CoA-carboxylase) ligase BirA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE86_9GAMM
birA, biotin-(acetyl-CoA-carboxylase) ligase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3244_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2546..3250
DNA (705bp) protein (235aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Type III pantothenate kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMH9_9GAMM
pantothenate kinase, type III
scnpilot_solids2_trim150_scaffold_3244_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3283..3942
DNA (660bp) protein (220aa)
Sporulation domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMH8_9GAMM
sporulation related protein
Sporulation related protein {ECO:0000313|EMBL:AGG87686.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3244_trna_1
unknown

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3980..4052
DNA (73bp)
transferRNA Thr
scnpilot_solids2_trim150_scaffold_3244_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4223..4465
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDY3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87688.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3244_8
unknown

Not on your lists

4566..4766
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3244_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5254..6168
DNA (915bp) protein (305aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
arginase (EC:3.5.3.1)
Arginase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYW3_9GAMM
scnpilot_solids2_trim150_scaffold_3244_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6618..7577
DNA (960bp) protein (320aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE79_9GAMM
scnpilot_solids2_trim150_scaffold_3244_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7635..7958
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMH1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87692.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3244_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8121..10349
DNA (2229bp) protein (743aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYV9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92400.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3244_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10428..10946
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE74_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97765.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative metal-dependent hydrolase
scnpilot_solids2_trim150_scaffold_3244_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10949..11593
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCZ3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87697.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3244_15
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11682..12455)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B760E5 rbh
Membrane protein {ECO:0000313|EMBL:EZH73280.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
hypothetical membrane protein
scnpilot_solids2_trim150_scaffold_3244_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12927..13781)
DNA (855bp) protein (285aa)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYV3_9GAMM
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EIL92394.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
scnpilot_solids2_trim150_scaffold_3244_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13778..14275)
DNA (498bp) protein (166aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component n=1 Tax=Rhodanobacter denitrificans RepID=M4NDY8_9GAMM
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component {ECO:0000313|EMBL:AGG87698.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 18 items

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