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scnpilot_solids2_trim150_scaffold_3476

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3476_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1003
DNA (1002bp) protein (334aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glutamine--tRNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJC5_9GAMM
scnpilot_solids2_trim150_scaffold_3476_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1014..1574
DNA (561bp) protein (187aa)
Zinc-binding CMP/dCMP deaminase protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYP0_9GAMM
Zinc-binding CMP/dCMP deaminase protein {ECO:0000313|EMBL:EIL92331.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytosine/adenosine deaminase
scnpilot_solids2_trim150_scaffold_3476_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1571..2281
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYN9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92330.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3476_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2408..4306
DNA (1899bp) protein (633aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Integral membrane sensor hybrid histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZG3_9GAMM
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_3476_trna_1
unknown

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comp(4347..4419)
DNA (73bp)
transferRNA Lys
scnpilot_solids2_trim150_scaffold_3476_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4496..5182)
DNA (687bp) protein (229aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
7-cyano-7-deazaguanine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGU6_9GAMM
queuosine biosynthesis protein QueC
scnpilot_solids2_trim150_scaffold_3476_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5286..5978)
DNA (693bp) protein (231aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZG5_9GAMM
organic radical activating enzyme
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3476_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5986..6783)
DNA (798bp) protein (266aa)
Tol-pal system protein YbgF n=1 Tax=Rhodanobacter denitrificans RepID=M4NBB9_9GAMM
tol-pal system protein YbgF
Tol-pal system protein YbgF {ECO:0000313|EMBL:AGG87889.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 8 items

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