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scnpilot_solids2_trim150_scaffold_3653

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3653_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..297
DNA (297bp) protein (99aa)
Peptide chain release factor 1 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKN6_9GAMM
bacterial peptide chain release factor 1 (bRF-1)
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3653_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(411..677)
DNA (267bp) protein (89aa)
Acylphosphatase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2T3_9GAMM
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acylphosphatase
scnpilot_solids2_trim150_scaffold_3653_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(677..1150)
DNA (474bp) protein (158aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKN9_9GAMM
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:EIM00031.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
thiol-disulfide isomerase-like thioredoxin
scnpilot_solids2_trim150_scaffold_3653_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1147..2424)
DNA (1278bp) protein (426aa)
hypothetical protein (EC:3.1.-.-)
UPF0761 membrane protein rbn n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKP0_9GAMM
UPF0761 membrane protein rbn {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_3653_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2530..3132
DNA (603bp) protein (201aa)
NAD(P)H:quinone oxidoreductase, type IV n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKP1_9GAMM
NAD(P)H:quinone oxidoreductase, type IV
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3653_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3129..3491
DNA (363bp) protein (121aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NEW8_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG88103.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3653_7
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3495..4190)
DNA (696bp) protein (232aa)
Putative acetyltransferase id=1262168 bin=GWE1_Burkholderiales_65_30 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
acetyltransferase
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_solids2_trim150_scaffold_3653_8
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4190..4645)
DNA (456bp) protein (152aa)
histone acetyltransferase HPA2-like acetyltransferase; K03829 putative acetyltransferase [EC:2.3.1.-]
Acetyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZ93_9GAMM
Acetyltransferase {ECO:0000313|EMBL:KIL37142.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
scnpilot_solids2_trim150_scaffold_3653_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5930..6376)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W880_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95671.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3653_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7787..8068)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAJ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96481.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_3653_11
unknown

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comp(8143..8538)
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3653_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9991..10776)
DNA (786bp) protein (262aa)
Acyl-CoA thioesterase n=2 Tax=Rhodanobacter RepID=M4NBR7_9GAMM
acyl-CoA thioesterase
Acyl-CoA thioesterase {ECO:0000313|EMBL:AGG88100.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3653_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10879..12519
DNA (1641bp) protein (547aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBW6_9GAMM
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGG88099.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3653_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12606..13010
DNA (405bp) protein (135aa)
L-asparaginase/GlutRNAGln amidotransferase subunit D (EC:3.5.1.1)
L-asparaginase/GlutRNAGln amidotransferase subunit D {ECO:0000313|EMBL:AGG88098.1}; EC=3.5.1.1 {ECO:0000313|EMBL:AGG88098.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Asparaginase n=2 Tax=Rhodanobacter RepID=I4WH79_9GAMM
Displaying 14 items

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