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scnpilot_solids2_trim150_scaffold_3656

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3656_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..706)
DNA (705bp) protein (235aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMV9_9GAMM
glycosyl transferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3656_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(703..1494)
DNA (792bp) protein (264aa)
Beta-ketoacyl synthase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NME1_9GAMM
beta-ketoacyl synthase family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3656_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1491..2255)
DNA (765bp) protein (255aa)
3-oxoacyl-(Acyl carrier protein) synthase I n=1 Tax=Rhodanobacter denitrificans RepID=I4WMV7_9GAMM
3-oxoacyl-(acyl-carrier-protein) synthase
3-oxoacyl-(Acyl-carrier-protein) synthase {ECO:0000313|EMBL:AGG90817.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3656_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2219..2566)
DNA (348bp) protein (116aa)
3-oxoacyl-(Acyl-carrier-protein) synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NL64_9GAMM
3-oxoacyl-(acyl-carrier-protein) synthase
3-oxoacyl-(Acyl-carrier-protein) synthase {ECO:0000313|EMBL:AGG90817.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3656_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2643..3392
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMV6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90816.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3656_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3488..4258
DNA (771bp) protein (257aa)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
coproporphyrinogen III oxidase; K00228 coproporphyrinogen III oxidase [EC:1.3.3.3]
coproporphyrinogen III oxidase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036752FF
scnpilot_solids2_trim150_scaffold_3656_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4346..4927)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2N2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93723.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3656_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5070..5813
DNA (744bp) protein (248aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xant
phosphoglycerate mutase (EC:5.4.2.1) rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2N3_9GAMM rbh
scnpilot_solids2_trim150_scaffold_3656_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5911..6471
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF96_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98137.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3656_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6491..7807)
DNA (1317bp) protein (439aa)
N-acyl-L-amino acid amidohydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF97_9GAMM
N-acyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:EIL98138.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Metal-dependent amidase/aminoacylase/carboxypeptidase
scnpilot_solids2_trim150_scaffold_3656_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7903..9021)
DNA (1119bp) protein (373aa)
Putative ATPase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMU9_9GAMM
putative ATPase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3656_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9030..9719)
DNA (690bp) protein (230aa)
Putative hydrolase of the alpha/beta superfamily n=1 Tax=Rhodanobacter denitrificans RepID=M4NMD1_9GAMM
putative hydrolase of the alpha/beta superfamily
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3656_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9762..10352
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2N8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93729.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3656_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10701..11183)
DNA (483bp) protein (161aa)
Cytochrome c5 n=1 Tax=Rhodanobacter denitrificans RepID=M4NTI6_9GAMM
cytochrome c5
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3656_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11618..12835
DNA (1218bp) protein (406aa)
Membrane fusion protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFA3_9GAMM
Membrane fusion protein {ECO:0000313|EMBL:EIL98144.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RND family efflux transporter, MFP subunit
scnpilot_solids2_trim150_scaffold_3656_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12920..13486
DNA (567bp) protein (189aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLB0_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIL88001.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cation/multidrug efflux pump
Displaying 16 items

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