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scnpilot_solids2_trim150_scaffold_3685

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3685_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1759
DNA (1758bp) protein (586aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003475C6E
Hemagglutinin/hemolysin {ECO:0000313|EMBL:EIL94006.1}; Flags: Fragment;; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
yapH; hemagglutinin/hemolysin
scnpilot_solids2_trim150_scaffold_3685_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1725..3647
DNA (1923bp) protein (641aa)
Hemagglutinin/hemolysin (Fragment) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3G5_9GAMM
Hemagglutinin/hemolysin {ECO:0000313|EMBL:EIL94006.1}; Flags: Fragment;; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
conserved protein of unknown function; RTX toxins and related Ca2+-binding domain
scnpilot_solids2_trim150_scaffold_3685_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3626..4777
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3G6_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3685_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4802..5836)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3G7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94008.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
type VI secretion-associated protein, ImpA family; K11902 type VI secretion system protein ImpA rbh
scnpilot_solids2_trim150_scaffold_3685_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5927..6412)
DNA (486bp) protein (162aa)
Putative oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3H0_9GAMM
Putative oxidoreductase {ECO:0000313|EMBL:EIL94011.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
chromate reductase
scnpilot_solids2_trim150_scaffold_3685_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6456..7397
DNA (942bp) protein (314aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC:2.3.1.117) rbh
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYQ5_9GAMM rbh
scnpilot_solids2_trim150_scaffold_3685_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7499..7852
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU29_9GAMM
transcriptional regulator, Spx/MgsR family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3685_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7860..8351
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU30_9GAMM
putative small integral membrane protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3685_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8354..9415
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3H4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94015.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_3685_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9458..10597
DNA (1140bp) protein (380aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18) rbh
Succinyl-diaminopimelate desuccinylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3H5_9GAMM
scnpilot_solids2_trim150_scaffold_3685_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10682..10885)
DNA (204bp) protein (68aa)
Sec-independent protein translocase protein TatA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU32_9GAMM
twin arginine-targeting protein translocase, TatA/E family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3685_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10900..11541)
DNA (642bp) protein (214aa)
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3I1_9GAMM
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL {ECO:0000313|EMBL:EIL94022.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative lipoprotein involved in nitrous oxide reduction rbh
scnpilot_solids2_trim150_scaffold_3685_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11554..12387)
DNA (834bp) protein (278aa)
Multi-copper enzyme maturation ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3I2_9GAMM rbh
Multi-copper enzyme maturation ABC transporter permease {ECO:0000313|EMBL:EIL94023.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type transport system involved in multi-copper enzyme maturation, permease component rbh
scnpilot_solids2_trim150_scaffold_3685_14
Neisseria sp. HMSC06F02, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12407..13351
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M6C9_NEISI
Uncharacterized protein {ECO:0000313|EMBL:KJJ18721.1}; TaxID=1581124 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria sp. HMSC06F02.;"
scnpilot_solids2_trim150_scaffold_3685_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13264..14019)
DNA (756bp) protein (252aa)
Nitrous oxidase accessory protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NQH3_9GAMM
nitrous oxidase accessory protein
Nitrous oxidase accessory protein {ECO:0000313|EMBL:AGG89851.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3685_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14495..14587)
DNA (93bp) protein (31aa)
Nitrous-oxide reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYR4_9GAMM
nitrous oxide reductase
Nitrous oxide reductase {ECO:0000313|EMBL:AGG89850.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 16 items

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