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scnpilot_solids2_trim150_scaffold_3761

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3761_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..612)
DNA (612bp) protein (204aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Acetate CoA-transferase YdiF n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV45_9GAMM
3-oxoacid CoA-transferase, B subunit/3-oxoacid CoA-transferase, A subunit
scnpilot_solids2_trim150_scaffold_3761_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

768..1139
DNA (372bp) protein (124aa)
CopY family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV44_9GAMM
CopY family transcriptional regulator {ECO:0000313|EMBL:EIL91085.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_3761_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1126..2442
DNA (1317bp) protein (439aa)
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ07_9GAMM
antirepressor regulating drug resistance protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3761_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2503..3555
DNA (1053bp) protein (351aa)
Asparaginase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBR6_9GAMM
asparaginase
Asparaginase {ECO:0000313|EMBL:AGG88049.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3761_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3643..4101)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV41_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91082.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3761_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4098..5264)
DNA (1167bp) protein (389aa)
Signal peptide protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV40_9GAMM
Signal peptide protein {ECO:0000313|EMBL:EIL91081.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3761_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5331..7571)
DNA (2241bp) protein (747aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV39_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EIL91080.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane receptor protein
scnpilot_solids2_trim150_scaffold_3761_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7665..8249)
DNA (585bp) protein (195aa)
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ02_9GAMM
response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein
Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein {ECO:0000313|EMBL:AGG88053.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3761_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8320..9612)
DNA (1293bp) protein (431aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ01_9GAMM
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_3761_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9679..11277)
DNA (1599bp) protein (533aa)
Amino acid/peptide transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8M5_9GAMM rbh
Amino acid/peptide transporter {ECO:0000313|EMBL:EIL95816.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family rbh
scnpilot_solids2_trim150_scaffold_3761_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11414..11785
DNA (372bp) protein (124aa)
diacylglycerol kinase (EC:2.7.1.107)
Diacylglycerol kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV35_9GAMM
Diacylglycerol kinase {ECO:0000313|EMBL:EIL91076.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_3761_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11859..12479
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV34_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3761_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12481..13326
DNA (846bp) protein (282aa)
Beta-propeller domain-containing protein, methanol dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYZ7_9GAMM
beta-propeller domain-containing protein, methanol dehydrogenase
Beta-propeller domain-containing protein, methanol dehydrogenase {ECO:0000313|EMBL:AGG88058.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3761_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13328..13831
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8M1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95812.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3761_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14023..14844
DNA (822bp) protein (274aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZF8_9GAMM
prolipoprotein diacylglyceryl transferase
scnpilot_solids2_trim150_scaffold_3761_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14989..15717)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ02_9GAMM
TIGR00266 family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 16 items

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