ggKbase home page

scnpilot_solids2_trim150_scaffold_3803

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3803_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1308)
DNA (1308bp) protein (436aa)
Membrane protein insertase YidC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUB7_9GAMM
preprotein translocase subunit YidC
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3803_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1371..1775)
DNA (405bp) protein (135aa)
ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=2 Tax=Rhodanobacter denitrificans RepID=M4NUB6_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3803_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1790..1924)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUB5_9GAMM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribosomal protein L34
scnpilot_solids2_trim150_scaffold_3803_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2113..3447
DNA (1335bp) protein (445aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBW1_9GAMM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
chromosomal replication initiator protein DnaA
scnpilot_solids2_trim150_scaffold_3803_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3716..4816
DNA (1101bp) protein (367aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUB3_9GAMM
scnpilot_solids2_trim150_scaffold_3803_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4913..5995
DNA (1083bp) protein (361aa)
DNA replication and repair protein RecF n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBV9_9GAMM
DNA replication and repair protein RecF
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3803_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6093..8471
DNA (2379bp) protein (793aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBV8_9GAMM
scnpilot_solids2_trim150_scaffold_3803_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8708..10003
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUB0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90801.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3803_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10269..10868
DNA (600bp) protein (200aa)
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUJ0_9GAMM
TonB family protein
TonB family protein {ECO:0000313|EMBL:AGG87194.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3803_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10950..11627
DNA (678bp) protein (226aa)
Biopolymer transport ExbB protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUJ1_9GAMM
Biopolymer transport ExbB protein {ECO:0000313|EMBL:EIL96946.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
biopolymer transport protein
Displaying 10 items

View Taxonomy