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scnpilot_solids2_trim150_scaffold_3848

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3848_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..537)
DNA (537bp) protein (179aa)
Phosphate starvation-inducible protein PhoH n=1 Tax=Rhodanobacter denitrificans RepID=I4WYF1_9GAMM
phosphate starvation-inducible protein PhoH, predicted ATPase
Phosphate starvation-inducible protein PhoH, predicted ATPase {ECO:0000313|EMBL:AGG90027.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3848_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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638..1312
DNA (675bp) protein (225aa)
Regulatory protein TetR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D2_9GAMM
Regulatory protein TetR {ECO:0000313|EMBL:EIL92923.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_3848_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1309..2277
DNA (969bp) protein (323aa)
Multidrug resistance efflux pump n=1 Tax=Rhodanobacter denitrificans RepID=M4NGG4_9GAMM rbh
multidrug resistance efflux pump rbh
Multidrug resistance efflux pump {ECO:0000313|EMBL:AGG90025.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3848_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2274..3218
DNA (945bp) protein (315aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYF4_9GAMM rbh
ABC-type multidrug transport system, ATPase component rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3848_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3215..4324
DNA (1110bp) protein (370aa)
ABC-type multidrug transport system, permease component n=1 Tax=Rhodanobacter denitrificans RepID=M4NK37_9GAMM rbh
ABC-type multidrug transport system, permease component rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3848_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4352..4843)
DNA (492bp) protein (164aa)
Histone acetyltransferase HPA11 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D6_9GAMM
Histone acetyltransferase HPA11 {ECO:0000313|EMBL:EIL92927.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetyltransferase
scnpilot_solids2_trim150_scaffold_3848_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4840..6066)
DNA (1227bp) protein (409aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Rhodanobacter denitrificans RepID=M4NR22_9GAMM
tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
scnpilot_solids2_trim150_scaffold_3848_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6336..7487
DNA (1152bp) protein (384aa)
Lytic murein transglycosylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D8_9GAMM
Lytic murein transglycosylase {ECO:0000313|EMBL:EIL92929.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
soluble lytic murein transglycosylase-like protein
scnpilot_solids2_trim150_scaffold_3848_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7512..8696)
DNA (1185bp) protein (395aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WYF9_9GAMM
trypsin-like serine protease with C-terminal PDZ domain
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:AGG90019.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3848_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8860..9456
DNA (597bp) protein (199aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WYG0_9GAMM
ubiquinol-cytochrome c reductase, iron-sulfur subunit
scnpilot_solids2_trim150_scaffold_3848_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9456..9779
DNA (324bp) protein (108aa)
Cytochrome b n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMB5_9GAMM
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cytochrome b subunit of the bc complex
Displaying 11 items

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