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scnpilot_solids2_trim150_scaffold_2096

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2096_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..337
DNA (336bp) protein (112aa)
TolC family type I secretion outer membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN7_9GAMM
type I secretion outer membrane protein, TolC family
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:AGG87539.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2096_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(350..1618)
DNA (1269bp) protein (423aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN6_9GAMM
3-deoxy-D-manno-octulosonic-acid transferase
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:AGG87538.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2096_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1695..2630
DNA (936bp) protein (312aa)
Lipid A biosynthesis lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; EC=2.3.1.241 {ECO:0000256|HAMAP-Rule:MF_01942};; Kdo(2)-lipid IV(A) lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Lipid A biosynthesis lauroyl acyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV3_9GAMM rbh
lipid A biosynthesis lauroyl/palmitoleoyl acyltransferase rbh
scnpilot_solids2_trim150_scaffold_2096_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2715..3050)
DNA (336bp) protein (112aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV6_9GAMM
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL97647.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycosyl transferase
scnpilot_solids2_trim150_scaffold_2096_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3338..4669)
DNA (1332bp) protein (444aa)
Lipid A core--O-antigen ligase-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN1_9GAMM
lipid A core-O-antigen ligase-like enyme
Lipid A core-O-antigen ligase-like enyme {ECO:0000313|EMBL:AGG87533.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2096_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4726..5883)
DNA (1158bp) protein (386aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCN1_9GAMM
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGG87532.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2096_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5938..6147)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97650.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2096_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6344..7606
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM8_9GAMM
Na+/proline symporter
Na+/proline symporter {ECO:0000313|EMBL:AGG87530.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2096_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7686..8279)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93957.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2096_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8461..9477
DNA (1017bp) protein (339aa)
Putative nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM5_9GAMM
putative nucleoside-diphosphate-sugar epimerase
Putative nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGG87527.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2096_11

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comp(9550..12567)
DNA (3018bp) protein (1006aa)
Thiazole biosynthesis (Fragment) n=2 Tax=mine drainage metagenome RepID=T0ZA60_9ZZZZ rbh
Thiazole biosynthesis {ECO:0000313|EMBL:EQD41938.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
two-component system sensor-response regulator hybrid protein rbh
scnpilot_solids2_trim150_scaffold_2096_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12727..14328)
DNA (1602bp) protein (534aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B8_9GAMM
glutamine synthetase adenylyltransferase
Displaying 12 items

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