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scnpilot_solids2_trim150_scaffold_2411

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2411_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1954)
DNA (1953bp) protein (651aa)
Cation transporting P-type ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0R3_9GAMM
Cation transporting P-type ATPase {ECO:0000313|EMBL:EIL93054.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
P-type ATPase, translocating
scnpilot_solids2_trim150_scaffold_2411_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1977..2414)
DNA (438bp) protein (146aa)
Universal stress protein UspA-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYP9_9GAMM
universal stress protein UspA-like protein
Universal stress protein UspA-like protein {ECO:0000313|EMBL:AGG89865.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2411_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2440..3201)
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter denitrificans RepID=I4WYQ0_9GAMM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89864.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2411_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3310..4428)
DNA (1119bp) protein (373aa)
Pyridoxal-5'-phosphate-dependent protein subunit beta n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTY6_9GAMM
Pyridoxal-5'-phosphate-dependent protein subunit beta {ECO:0000313|EMBL:EIM02928.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cysteine synthase
scnpilot_solids2_trim150_scaffold_2411_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4671..5108
DNA (438bp) protein (146aa)
Integral membrane protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VX95_9GAMM
Integral membrane protein {ECO:0000313|EMBL:EIL91836.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2411_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5134..5634
DNA (501bp) protein (167aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
peroxiredoxin (EC:1.11.1.5)
Probable thiol peroxidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VX94_9GAMM
scnpilot_solids2_trim150_scaffold_2411_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5829..6236)
DNA (408bp) protein (136aa)
Globin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1C9_9GAMM
Globin {ECO:0000313|EMBL:EIL93270.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
truncated hemoglobin
scnpilot_solids2_trim150_scaffold_2411_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6325..6771)
DNA (447bp) protein (149aa)
Azurin n=1 Tax=Rhodanobacter denitrificans RepID=I4WME7_9GAMM
azurin
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2411_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6913..7236
DNA (324bp) protein (108aa)
Ferredoxin n=1 Tax=Rhodanobacter denitrificans RepID=I4WME6_9GAMM
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AGG87717.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2411_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7424..9733
DNA (2310bp) protein (770aa)
Nitric-oxide reductase subunit B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1D2_9GAMM
Nitric-oxide reductase subunit B {ECO:0000313|EMBL:EIL93273.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
nitric oxide reductase large subunit
scnpilot_solids2_trim150_scaffold_2411_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9805..9942)
DNA (138bp) protein (46aa)
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glyceraldehyde-3-phosphate dehydrogenase (NAD+) n=1 Tax=Rhodanobacter denitrificans RepID=M4NE03_9GAMM
Displaying 11 items

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