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scnpilot_solids2_trim150_scaffold_2592

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2592_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..447)
DNA (447bp) protein (149aa)
Elongation factor G n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VU26_9GAMM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
translation elongation factor EF-G
scnpilot_solids2_trim150_scaffold_2592_2
unknown

Not on your lists

comp(676..1011)
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2592_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1248..1931)
DNA (684bp) protein (228aa)
(Fe-S)-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSS6_9GAMM
Xaa-Pro aminopeptidase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2592_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1928..2281)
DNA (354bp) protein (118aa)
membrane protein n=1 Tax=Dyella japonica RepID=UPI000373F50F
Membrane protein {ECO:0000313|EMBL:AHX16020.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2592_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2361..3107)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPX1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01513.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2592_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3489..4499
DNA (1011bp) protein (337aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
homoserine acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W149_9GAMM
scnpilot_solids2_trim150_scaffold_2592_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4723..5697
DNA (975bp) protein (325aa)
O-succinylhomoserine (thiol)-lyase (EC:2.5.1.48)
O-succinylhomoserine (Thiol)-lyase {ECO:0000313|EMBL:AGG87801.1}; EC=2.5.1.48 {ECO:0000313|EMBL:AGG87801.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
O-succinylhomoserine (Thiol)-lyase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT24_9GAMM
scnpilot_solids2_trim150_scaffold_2592_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5694..6776
DNA (1083bp) protein (361aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPW7_9GAMM
scnpilot_solids2_trim150_scaffold_2592_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6786..7373)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W152_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93193.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2592_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7442..9142)
DNA (1701bp) protein (567aa)
Amino acid transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W153_9GAMM
Amino acid transporter {ECO:0000313|EMBL:EIL93194.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amino acid transporter rbh
scnpilot_solids2_trim150_scaffold_2592_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9265..9822)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W4J2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94383.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids2_trim150_scaffold_2592_12
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9819..11105)
DNA (1287bp) protein (429aa)
hsdA; restriction modification system DNA specificity domain-containing protein (EC:3.1.21.3); K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Type I restriction modification DNA specificity domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WK56_9SYNE rbh
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EDX84908.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
scnpilot_solids2_trim150_scaffold_2592_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11102..12742)
DNA (1641bp) protein (547aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
N-6 DNA methylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W4J4_9GAMM rbh
N-6 DNA methylase {ECO:0000313|EMBL:EIL94385.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids2_trim150_scaffold_2592_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12771..13070)
DNA (300bp) protein (100aa)
Plasmid stabilization system n=1 Tax=Rhodanobacter sp. 115 RepID=I4W4J5_9GAMM
Plasmid stabilization system {ECO:0000313|EMBL:EIL94386.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
plasmid stabilization system
scnpilot_solids2_trim150_scaffold_2592_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13067..13336)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W4J6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94387.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2592_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13410..16505)
DNA (3096bp) protein (1032aa)
hsdR; type I site-specific deoxyribonuclease (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] rbh
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI00035E6CEC rbh
Type I site-specific deoxyribonuclease {ECO:0000313|EMBL:EIL94388.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids2_trim150_scaffold_2592_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16628..16753)
DNA (126bp) protein (42aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPV7_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 17 items

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