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scnpilot_solids2_trim150_scaffold_2816

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2816_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94..549)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWU3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89549.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2816_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1938..2714
DNA (777bp) protein (259aa)
Membrane protease n=1 Tax=Rhodanobacter denitrificans RepID=I4WWU1_9GAMM rbh
membrane protease subunit, stomatin/prohibitin rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2816_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2736..3590
DNA (855bp) protein (285aa)
Precorrin-3B methylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NPH4_9GAMM
precorrin-3B methylase
Precorrin-3B methylase {ECO:0000313|EMBL:AGG89546.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2816_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3702..3998
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWT6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89542.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2816_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4048..5826
DNA (1779bp) protein (593aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NPG8_9GAMM rbh
diguanylate cyclase (GGDEF) domain-containing protein rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG89541.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2816_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6443..6748
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWT6_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2816_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6752..8530
DNA (1779bp) protein (593aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD76_9GAMM
diguanylate cyclase (GGDEF) domain-containing protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2816_8
unknown

Not on your lists

comp(8756..8992)
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2816_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9043..10308
DNA (1266bp) protein (422aa)
aminopeptidase n=1 Tax=Dyella ginsengisoli RepID=UPI00034A12BC
Peptidase M28 {ECO:0000313|EMBL:EIL97413.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative aminopeptidase
scnpilot_solids2_trim150_scaffold_2816_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10452..13205)
DNA (2754bp) protein (918aa)
Putative lipoprotein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD71_9GAMM
Putative lipoprotein {ECO:0000313|EMBL:EIL97412.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zinc carboxypeptidase
scnpilot_solids2_trim150_scaffold_2816_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13360..15345)
DNA (1986bp) protein (662aa)
Prolyl oligopeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD70_9GAMM
Prolyl oligopeptidase {ECO:0000313|EMBL:EIL97411.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
scnpilot_solids2_trim150_scaffold_2816_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15526..15978)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5L5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94756.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2816_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16164..17033)
DNA (870bp) protein (290aa)
Thioredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5L6_9GAMM
Thioredoxin {ECO:0000313|EMBL:EIL94757.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
thioredoxin
scnpilot_solids2_trim150_scaffold_2816_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17153..17704
DNA (552bp) protein (184aa)
Paraquat-inducible protein a n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JF17_9PSED
Paraquat-inducible protein A {ECO:0000313|EMBL:AHX12403.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative paraquat-inducible protein A
scnpilot_solids2_trim150_scaffold_2816_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17701..18354
DNA (654bp) protein (218aa)
Putative paraquat-inducible protein A n=1 Tax=Rhodanobacter denitrificans RepID=I4WTF2_9GAMM
Putative paraquat-inducible protein A {ECO:0000313|EMBL:EIM01759.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative paraquat-inducible protein A
scnpilot_solids2_trim150_scaffold_2816_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18347..19435
DNA (1089bp) protein (363aa)
PqiB family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQL8_9GAMM
PqiB family protein {ECO:0000313|EMBL:EIM01760.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
qaraquat-inducible protein B
scnpilot_solids2_trim150_scaffold_2816_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19737..19874
DNA (138bp) protein (46aa)
PqiB family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQL8_9GAMM
PqiB family protein {ECO:0000313|EMBL:EIM01760.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_2816_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19871..20479
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFA1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88288.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2816_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20611..21033
DNA (423bp) protein (141aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQM0_9GAMM
Displaying 19 items

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