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scnpilot_solids2_trim150_scaffold_4323

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4323_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..523
DNA (522bp) protein (174aa)
3-isopropylmalate dehydratase small subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX9_9GAMM
3-isopropylmalate dehydratase, small subunit
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4323_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

520..1446
DNA (927bp) protein (309aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-isopropylmalate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK95_9GAMM
3-isopropylmalate dehydrogenase
scnpilot_solids2_trim150_scaffold_4323_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1839..3551
DNA (1713bp) protein (571aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Dihydroxy-acid dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=M4NTA0_9GAMM rbh
dihydroxyacid dehydratase/phosphogluconate dehydratase rbh
scnpilot_solids2_trim150_scaffold_4323_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3548..4558
DNA (1011bp) protein (337aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGJ0_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4323_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4627..4968
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96068.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4323_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5018..6643
DNA (1626bp) protein (542aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acetolactate synthase, large subunit (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX5_9GAMM
scnpilot_solids2_trim150_scaffold_4323_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6839..7087
DNA (249bp) protein (83aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:AGG90719.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AGG90719.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Acetolactate synthase, small subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WK91_9GAMM
scnpilot_solids2_trim150_scaffold_4323_8
unknown

Not on your lists

comp(7923..8048)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4323_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8566..9702)
DNA (1137bp) protein (379aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK89_9GAMM
diguanylate cyclase (GGDEF) domain-containing protein
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG90721.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4323_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9802..10539)
DNA (738bp) protein (246aa)
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2M5_9GAMM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4323_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10553..10987)
DNA (435bp) protein (145aa)
Putative 3-hydroxylacyl-(Acyl carrier protein) dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMW2_9GAMM
putative 3-hydroxylacyl-(acyl carrier protein) dehydratase
Putative 3-hydroxylacyl-(Acyl carrier protein) dehydratase {ECO:0000313|EMBL:AGG90822.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4323_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10971..13178)
DNA (2208bp) protein (736aa)
Putative exporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLD2_9GAMM
Putative exporter {ECO:0000313|EMBL:EIL88023.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative exporter
scnpilot_solids2_trim150_scaffold_4323_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13236..13787)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFP4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98285.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4323_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13819..14775)
DNA (957bp) protein (319aa)
Acyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFP3_9GAMM
Acyltransferase {ECO:0000313|EMBL:EIL98284.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative acyltransferase
scnpilot_solids2_trim150_scaffold_4323_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14772..15074)
DNA (303bp) protein (101aa)
(3R)-hydroxymyristoyl-ACP dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMW6_9GAMM
3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase
3-hydroxymyristoyl/3-hydroxydecanoyl-(Acyl carrier protein) dehydratase {ECO:0000313|EMBL:AGG90826.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4323_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15127..15708)
DNA (582bp) protein (194aa)
Ketosynthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFP1_9GAMM
Ketosynthase {ECO:0000313|EMBL:EIL98282.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4323_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15854..16120)
DNA (267bp) protein (89aa)
Acyl carrier protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2L8_9GAMM
Acyl carrier protein {ECO:0000313|EMBL:EIL93709.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl carrier protein
scnpilot_solids2_trim150_scaffold_4323_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16140..17204
DNA (1065bp) protein (355aa)
Pteridine-dependent deoxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMW9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90829.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4323_19
unknown

Not on your lists

comp(17201..17740)
DNA (540bp) protein (180aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4323_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17854..19248)
DNA (1395bp) protein (465aa)
UDP-N-acetylglucosamine pyrophosphorylase (EC:2.7.7.23 2.3.1.157)
Bifunctional protein GlmU n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFN8_9GAMM
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_4323_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19408..19980
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034615D5
Protein of unknown function (DUF3016)
Uncharacterized protein {ECO:0000313|EMBL:AGG87612.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4323_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20005..20427)
DNA (423bp) protein (141aa)
ATP synthase epsilon chain n=1 Tax=Rhodanobacter denitrificans RepID=M4NL78_9GAMM
ATP synthase, F1 epsilon subunit
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4323_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20544..21026)
DNA (483bp) protein (161aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
ATP synthase subunit beta n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFN5_9GAMM
ATP synthase, F1 beta subunit
Displaying 23 items

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