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scnpilot_solids2_trim150_scaffold_4529

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4529_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..376
DNA (375bp) protein (125aa)
Heavy metal efflux pump CzcA n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUI8_9GAMM
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:EIL90879.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_solids2_trim150_scaffold_4529_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(497..1318)
DNA (822bp) protein (274aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X1_9GAMM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EIL93462.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
negative regulator of beta-lactamase expression
scnpilot_solids2_trim150_scaffold_4529_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1378..2424)
DNA (1047bp) protein (349aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Rhodanobacter denitrificans RepID=M4NHX3_9GAMM
penicillin-binding protein, beta-lactamase class C
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:AGG90479.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4529_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2562..3377)
DNA (816bp) protein (272aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Peptidase M15D vanX D-ala-D-ala dipeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN80_9GAMM rbh
D-Ala-D-Ala dipeptidase vanX rbh
scnpilot_solids2_trim150_scaffold_4529_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3374..3973)
DNA (600bp) protein (200aa)
Beta-lactamase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN79_9GAMM
penicillin-binding protein, beta-lactamase class C
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4529_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3925..4857)
DNA (933bp) protein (311aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Rhodanobacter denitrificans RepID=M4NK90_9GAMM
penicillin-binding protein, beta-lactamase class C
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4529_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4841..6055)
DNA (1215bp) protein (405aa)
Membrane dipeptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW36_9GAMM rbh
Zn-dependent dipeptidase, microsomal dipeptidase rbh
Zn-dependent dipeptidase, microsomal dipeptidase {ECO:0000313|EMBL:AGG90476.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4529_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6052..7359)
DNA (1308bp) protein (436aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Diaminopimelate decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW35_9GAMM
diaminopimelate decarboxylase
scnpilot_solids2_trim150_scaffold_4529_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7451..8842)
DNA (1392bp) protein (464aa)
Oar protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1W5_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:AHX15752.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
outer membrane receptor protein
Displaying 9 items

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