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scnpilot_solids2_trim150_scaffold_4796

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4796_1
unknown

Not on your lists

comp(2..79)
DNA (78bp) protein (26aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4796_2
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

406..1134
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0G6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI77690.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4796_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1388..1684)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRS6_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4796_4
unknown

Not on your lists

comp(1750..2067)
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4796_trna_1
unknown

Not on your lists

comp(2436..2508)
DNA (73bp)
transferRNA Phe
scnpilot_solids2_trim150_scaffold_4796_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2522..2737)
DNA (216bp) protein (72aa)
Probable Fe(2+)-trafficking protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B6_9GAMM
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Fe-S cluster protector protein
scnpilot_solids2_trim150_scaffold_4796_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2939..4240)
DNA (1302bp) protein (434aa)
Diguanylate phosphodiesterase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ5_9GAMM
putative signal transduction protein containing EAL and modified HD-GYP domains
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4796_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4331..4777)
DNA (447bp) protein (149aa)
Flagellar biosynthesis/type III secretory pathway chaperone n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRX7_9GAMM
Flagellar biosynthesis/type III secretory pathway chaperone {ECO:0000313|EMBL:EIM02219.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
flagellar biosynthesis/type III secretory pathway chaperone
scnpilot_solids2_trim150_scaffold_4796_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4774..5097)
DNA (324bp) protein (108aa)
Anti-sigma-28 factor FlgM n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ3_9GAMM
flagellar biosynthesis anti-sigma factor FlgM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4796_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5253..5957)
DNA (705bp) protein (235aa)
Flagellar basal body P-ring biosynthesis protein FlgA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRX9_9GAMM
flagella basal body P-ring formation protein FlgA
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_4796_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5954..7126)
DNA (1173bp) protein (391aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ26_9GAMM
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGG90092.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4796_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7370..8317
DNA (948bp) protein (316aa)
Chemotaxis signal transduction protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ0_9GAMM
chemotaxis signal transduction protein
Chemotaxis signal transduction protein {ECO:0000313|EMBL:AGG90091.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4796_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8486..8887
DNA (402bp) protein (134aa)
Flagellar basal body rod protein FlgB n=1 Tax=Rhodanobacter denitrificans RepID=I4WQP9_9GAMM
flagellar basal-body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4796_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8887..9294
DNA (408bp) protein (136aa)
Flagellar basal body rod protein FlgC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRY3_9GAMM
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
flagellar basal-body rod protein FlgC
scnpilot_solids2_trim150_scaffold_4796_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9341..9985
DNA (645bp) protein (215aa)
Flagellar hook capping protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQP7_9GAMM
flagellar hook capping protein
Flagellar hook capping protein {ECO:0000313|EMBL:AGG90088.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4796_15
unknown

Not on your lists

10026..10124
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4796_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10148..10621
DNA (474bp) protein (158aa)
Flagellar hook protein FlgE n=1 Tax=Rhodanobacter denitrificans RepID=I4WQP6_9GAMM
flagellar hook-basal body protein
Flagellar hook-basal body protein {ECO:0000313|EMBL:AGG90087.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 17 items

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