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scnpilot_solids2_trim150_scaffold_1346

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1346_1
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..166
DNA (165bp) protein (55aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Rhodanobacter sp. 115 RepID=I4W750_9GAMM
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LuxR family transcriptional regulator {ECO:0000313|EMBL:AHX14071.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_solids2_trim150_scaffold_1346_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

369..1736
DNA (1368bp) protein (456aa)
Polyketide cyclase/dehydrase and lipid transport n=1 Tax=Rhodanobacter denitrificans RepID=I4WYV0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89811.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1346_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1929..2873
DNA (945bp) protein (315aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Rhodanobacter denitrificans RepID=M4NFU2_9GAMM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AGG89810.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1346_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2870..3604
DNA (735bp) protein (245aa)
ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3V4_9GAMM
ABC transporter permease {ECO:0000313|EMBL:EIL94145.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
CcmB protein
scnpilot_solids2_trim150_scaffold_1346_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3608..5524
DNA (1917bp) protein (639aa)
ABC transporter involved in gliding motility, auxiliary component n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU73_9GAMM
ABC transporter involved in gliding motility, auxiliary component {ECO:0000313|EMBL:EIM03015.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type uncharacterized transport system involved in gliding motility, auxiliary component
scnpilot_solids2_trim150_scaffold_1346_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5645..6508
DNA (864bp) protein (288aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NI79_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG89807.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1346_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6519..6995)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NQC0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89806.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1346_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6992..7606)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYV6_9GAMM
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems {ECO:0000313|EMBL:AGG89805.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1346_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7689..8066
DNA (378bp) protein (126aa)
Uncharacterized small membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFX5_9GAMM
uncharacterized small membrane protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1346_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8116..8535
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYV8_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1346_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8572..8763)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYW0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89801.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1346_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8767..9642)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYW1_9GAMM
membrane protease subunit, stomatin/prohibitin
Membrane protease subunit, stomatin/prohibitin {ECO:0000313|EMBL:AGG89800.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1346_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9782..10963
DNA (1182bp) protein (394aa)
formate-dependent phosphoribosylglycinamide formyltransferase (EC:6.3.4.-)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacte
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Rhodanobacter denitrificans RepID=I4WYW2_9GAMM
scnpilot_solids2_trim150_scaffold_1346_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11032..12552
DNA (1521bp) protein (507aa)
glutamate synthase n=1 Tax=Dyella ginsengisoli RepID=UPI0003453638 rbh
Glutamate synthase {ECO:0000313|EMBL:AHX14058.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
glutamate synthase family protein
scnpilot_solids2_trim150_scaffold_1346_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12657..13364)
DNA (708bp) protein (236aa)
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Putative arginyl-tRNA--protein transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU84_9GAMM
putative arginyl-tRNA:protein arginylyltransferase
scnpilot_solids2_trim150_scaffold_1346_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13394..13786)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYW5_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1346_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13823..14704)
DNA (882bp) protein (294aa)
Acyl-CoA thiolesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3U0_9GAMM
Acyl-CoA thiolesterase {ECO:0000313|EMBL:EIL94131.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl-CoA thioesterase
scnpilot_solids2_trim150_scaffold_1346_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14758..15768)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYW7_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1346_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15882..16019)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU88_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03030.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1346_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16104..16919)
DNA (816bp) protein (272aa)
Transcriptional regulator protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU89_9GAMM
Transcriptional regulator protein {ECO:0000313|EMBL:EIM03031.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA-binding domain-containing protein, AraC-type
scnpilot_solids2_trim150_scaffold_1346_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16950..17504)
DNA (555bp) protein (185aa)
Negative regulator of beta-lactamase expression n=1 Tax=Rhodanobacter denitrificans RepID=M4NFS7_9GAMM
negative regulator of beta-lactamase expression
Negative regulator of beta-lactamase expression {ECO:0000313|EMBL:AGG89790.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1346_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17591..18118
DNA (528bp) protein (176aa)
Alpha/beta hydrolase superfamily enzyme, predicted hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYX2_9GAMM
alpha/beta hydrolase superfamily enzyme, predicted hydrolase
Alpha/beta hydrolase superfamily enzyme, predicted hydrolase {ECO:0000313|EMBL:AGG89789.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1346_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18115..20301
DNA (2187bp) protein (729aa)
Ribosomal RNA large subunit methyltransferase K/L n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3T7_9GAMM
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858, ECO:0000256|SAAS:SAAS00183812}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative N6-adenine-specific DNA methylase rbh
scnpilot_solids2_trim150_scaffold_1346_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20363..20806
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3T6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94127.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1346_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20999..22249
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU95_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03037.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
TIGR03440 family protein
scnpilot_solids2_trim150_scaffold_1346_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22246..23235
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY40_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03038.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative methyltransferase
scnpilot_solids2_trim150_scaffold_1346_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23260..24159)
DNA (900bp) protein (300aa)
Phenazine biosynthesis protein PhzF family protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M4P3_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX62974.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein; K06998 rbh
scnpilot_solids2_trim150_scaffold_1346_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24235..25740)
DNA (1506bp) protein (502aa)
Carboxypeptidase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3T2_9GAMM
Carboxypeptidase-like protein {ECO:0000313|EMBL:EIL94123.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
carboxypeptidase C (cathepsin A)
scnpilot_solids2_trim150_scaffold_1346_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25958..26401)
DNA (444bp) protein (148aa)
Thioredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3S8_9GAMM
Thioredoxin {ECO:0000313|EMBL:EIL94119.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
thioredoxin
scnpilot_solids2_trim150_scaffold_1346_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26488..27090)
DNA (603bp) protein (201aa)
Methionine-R-sulfoxide reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFR3_9GAMM
methionine-R-sulfoxide reductase
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:AGG89770.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 48 in total

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