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scnpilot_solids2_trim150_scaffold_1623

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1623_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..760
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VMM4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88465.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
aminopeptidase N
scnpilot_solids2_trim150_scaffold_1623_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(770..1612)
DNA (843bp) protein (281aa)
Small-conductance mechanosensitive channel n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDY9_9GAMM rbh
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:EIL97680.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
small-conductance mechanosensitive channel
scnpilot_solids2_trim150_scaffold_1623_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1688..1990)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W229_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93520.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF2845)
scnpilot_solids2_trim150_scaffold_1623_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2037..2612)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDJ9_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1623_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2692..3477)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WW83_9GAMM
Protein of unknown function (DUF2884)
Uncharacterized protein {ECO:0000313|EMBL:AGG90531.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1623_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3598..4476)
DNA (879bp) protein (293aa)
TonB family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W233_9GAMM
TonB family protein {ECO:0000313|EMBL:EIL93524.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane transport energization protein TonB
scnpilot_solids2_trim150_scaffold_1623_7
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4551..5102)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003049958
Uncharacterized protein {ECO:0000313|EMBL:AIF46744.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1623_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5102..5632)
DNA (531bp) protein (177aa)
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR37_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1623_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5738..6196)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WW86_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1623_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6425..6841
DNA (417bp) protein (139aa)
Universal stress protein UspA-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WW87_9GAMM
universal stress protein UspA-like protein
Universal stress protein UspA-like protein {ECO:0000313|EMBL:AGG90535.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1623_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6856..7305)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDK6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97547.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1623_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7374..8102)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE02_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97693.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1623_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8178..8480)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W241_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93532.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3247)
scnpilot_solids2_trim150_scaffold_1623_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8610..9527
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W243_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93534.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1623_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9744..10415
DNA (672bp) protein (224aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW95_9GAMM rbh
glutathione S-transferase rbh
Glutathione S-transferase {ECO:0000313|EMBL:AGG90543.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1623_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10507..10848
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W245_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93536.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1623_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10957..12555
DNA (1599bp) protein (533aa)
Major facilitator transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE10_9GAMM
Major facilitator transporter {ECO:0000313|EMBL:EIL97701.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
sugar phosphate permease
scnpilot_solids2_trim150_scaffold_1623_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12611..14362)
DNA (1752bp) protein (584aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Pyruvate dehydrogenase E1 component n=1 Tax=Rhodanobacter denitrificans RepID=I4WW98_9GAMM
pyruvate dehydrogenase E1 component, homodimeric type
Displaying 18 items

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