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scnpilot_solids2_trim150_scaffold_5626

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5626_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1141
DNA (1140bp) protein (380aa)
D-alanine/D-serine/glycine permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WA66_9GAMM
D-alanine/D-serine/glycine permease {ECO:0000313|EMBL:EIL96357.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
gamma-aminobutyrate permease-like transporter
scnpilot_solids2_trim150_scaffold_5626_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1190..1849)
DNA (660bp) protein (220aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIT8_9GAMM
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AGG89583.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5626_3
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1969..2850
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SE2_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:KGI76739.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5626_4
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2887..3609
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6AAEC
Uncharacterized protein {ECO:0000313|EMBL:KGI76739.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein; K07289 AsmA protein
scnpilot_solids2_trim150_scaffold_5626_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3986..4225
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WEC9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89582.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5626_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4231..4407
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0I1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92972.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
scnpilot_solids2_trim150_scaffold_5626_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4426..5001)
DNA (576bp) protein (192aa)
Putative transmembrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDA5_9GAMM rbh
Putative transmembrane protein {ECO:0000313|EMBL:EIL97446.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5626_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4998..5573)
DNA (576bp) protein (192aa)
Electron transport protein SCO1/SenC n=1 Tax=Rhodanobacter denitrificans RepID=I4WWW8_9GAMM
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems {ECO:0000313|EMBL:AGG89573.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5626_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5552..7009)
DNA (1458bp) protein (486aa)
Cytochrome c oxidase subunit I n=1 Tax=Rhodanobacter denitrificans RepID=I4WWW7_9GAMM
heme/copper-type cytochrome/quinol oxidase, subunit 1
Heme/copper-type cytochrome/quinol oxidase, subunit 1 {ECO:0000313|EMBL:AGG89572.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5626_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7006..7554)
DNA (549bp) protein (183aa)
Cytochrome c oxidase subunit II n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDA2_9GAMM rbh
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:EIL97443.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
heme/copper-type cytochrome/quinol oxidase, subunit 2 rbh
scnpilot_solids2_trim150_scaffold_5626_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7758..8171)
DNA (414bp) protein (138aa)
OsmC-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDA1_9GAMM
OsmC-like protein {ECO:0000313|EMBL:EIL97442.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative redox protein, regulator of disulfide bond formation
scnpilot_solids2_trim150_scaffold_5626_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8195..9820)
DNA (1626bp) protein (542aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWW4_9GAMM
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGG89569.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 12 items

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