ggKbase home page

scnpilot_solids2_trim150_scaffold_5970

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5970_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..268)
DNA (267bp) protein (89aa)
Nitroreductase-like oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCM8_9GAMM
Nitroreductase-like oxidoreductase {ECO:0000313|EMBL:EIL97219.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
oxidoreductase family protein; K07078
scnpilot_solids2_trim150_scaffold_5970_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(490..1317)
DNA (828bp) protein (276aa)
formamidopyrimidine-DNA glycosylase Fpg (EC:4.2.99.18)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Formamidopyrimidine-DNA glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJM4_9GAMM
scnpilot_solids2_trim150_scaffold_5970_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1331..1831)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKK6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90617.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5970_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1832..3187)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJM6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89640.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type uncharacterized transporter
scnpilot_solids2_trim150_scaffold_5970_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3187..3759)
DNA (573bp) protein (191aa)
ABC transporter permease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRD0_9GAMM
ABC transporter permease {ECO:0000313|EMBL:EIL89771.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5970_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3756..4469)
DNA (714bp) protein (238aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Rhodanobacter denitrificans RepID=M4NI92_9GAMM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AGG90614.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5970_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4657..4974
DNA (318bp) protein (106aa)
Fatty-acid desaturase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ6_9GAMM
Fatty-acid desaturase {ECO:0000313|EMBL:EIL89637.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
fatty-acid desaturase
scnpilot_solids2_trim150_scaffold_5970_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4974..5726
DNA (753bp) protein (251aa)
Fatty-acid desaturase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQZ6_9GAMM
fatty-acid desaturase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_5970_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5959..7071
DNA (1113bp) protein (371aa)
Saccharopine dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRC7_9GAMM
Saccharopine dehydrogenase {ECO:0000313|EMBL:AHX15032.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5970_10
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7061..7474)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F3E36A
Membrane protein {ECO:0000313|EMBL:AIF46154.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
thiol-disulfide oxidoreductase DCC
scnpilot_solids2_trim150_scaffold_5970_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7464..8012)
DNA (549bp) protein (183aa)
Saccharopine dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRC5_9GAMM
Saccharopine dehydrogenase {ECO:0000313|EMBL:EIL89766.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5970_12
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8200..8346)
DNA (147bp) protein (49aa)
50S ribosomal protein L33 n=1 Tax=Rhodanobacter sp. 115 RepID=I4W907_9GAMM
ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Displaying 12 items

View Taxonomy