ggKbase home page

scnpilot_solids2_trim150_scaffold_2118_5

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 3231..4298

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 355.0
  • Bit_score: 595
  • Evalue 3.20e-167
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EIL94712.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 355.0
  • Bit_score: 595
  • Evalue 4.50e-167
RND family efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 355.0
  • Bit_score: 535
  • Evalue 1.20e-149

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGAATCGTTTCCTCATCCTTTCCCTGCCGTGCATGATCCTGCTGGGCGGCCTGTTGCTCGGCTGCAGCAAGGCCGCGCCCGATGAAGACGAAGCGGCGGCGCCGGCGGGCGAAGTCGTGGTGACCACCGCCACGCCGACGCAACAGACCTTCCACGACAGCATCGACGCCTGGGGCAGCGCGGCGGGTGATCCGCAACATGCGCGCTCGATCAGTCTCGCCCACGGTGGCCAGGTCACCGCGCTGCAGGTGGCTGCGGGCCAGCCCGTCAAGCGCGGCCAGCCACTGCTGACGATCGCCCCGGATCCGGCGGCGCGCAGCGCCTACCAGCAGGCGCAGACCGCCCTGACCCTCGCCACGGGCGAGCTCAAGCGCACCGAACAACTGGCGTCGCAGCGGCTGGCCACGCAATCGCAATTGGCCACGGCGCGCAAGGCGCTGGCCGATGCGCAGTCGGCGCTGGACGCCCAACGGGCGCTGGGCGGCGGCGCGGCCAGCGAAACCGTCGATGCGCCGGCCGATGGGCTGGTCACCAGCTTGCAGGTCGGCCTCGGCGAACGGGTGGCGGCGAACGCGCCCTTGCTCAGCTTCACGCCCACCCAGGCCCTGCTCGCCGTGCTCGGCGTGCAGCCGGACGATGGCGCGCGGCTGCGCCCGGGGATGCCGGTGCAGTTGCAGCCGGTTTATGGCTCGCGCGAAACCTTTGTCGGCACGCTGCGCATGGTTGGCCAGTCGATCGATCCGCAGACCCACCTGCTCAACGCCCAGGTCGAATTGCCGGCCGCCGCCAGCGCCAGCCTGGTCGCGGGCGCGCCCCTGGATGCGCAGATCCACGCCGCGGATTTCACCGCATGGGCGGTGCCGCGCGGCGCCGTGTTGCACGACGAGCATGGCGACTATCTGTTTCAGGTCGAACACGGCCACGCCAAGCGGATCAAGGTGACCCTGCGCAGCGGGCAAGGCGACCCGGTGGGCGTGGACGGGCCGCTGGATGCGAAGGCCAGGGTCGTCGTGCTGGGCGTGTATGAACTCAACGACGGCGATGCGGTGCGGGAGGCGGCCAAGTGA
PROTEIN sequence
Length: 356
MNRFLILSLPCMILLGGLLLGCSKAAPDEDEAAAPAGEVVVTTATPTQQTFHDSIDAWGSAAGDPQHARSISLAHGGQVTALQVAAGQPVKRGQPLLTIAPDPAARSAYQQAQTALTLATGELKRTEQLASQRLATQSQLATARKALADAQSALDAQRALGGGAASETVDAPADGLVTSLQVGLGERVAANAPLLSFTPTQALLAVLGVQPDDGARLRPGMPVQLQPVYGSRETFVGTLRMVGQSIDPQTHLLNAQVELPAAASASLVAGAPLDAQIHAADFTAWAVPRGAVLHDEHGDYLFQVEHGHAKRIKVTLRSGQGDPVGVDGPLDAKARVVVLGVYELNDGDAVREAAK*