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scnpilot_solids2_trim150_scaffold_2118

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2118_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..252)
DNA (252bp) protein (84aa)
Class III aminotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H5_9GAMM
Class III aminotransferase {ECO:0000313|EMBL:EIL94716.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
4-aminobutyrate aminotransferase family protein
scnpilot_solids2_trim150_scaffold_2118_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(304..1002)
DNA (699bp) protein (233aa)
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphatephosphatase related protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNU1_9GAMM rbh
haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase rbh
Haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase {ECO:0000313|EMBL:AGG88240.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2118_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1169..1792
DNA (624bp) protein (208aa)
Phosphoesterase PA-phosphatase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H3_9GAMM
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:EIL94714.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAP2 superfamily protein
scnpilot_solids2_trim150_scaffold_2118_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1789..3234
DNA (1446bp) protein (482aa)
Outer membrane efflux protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H2_9GAMM
Outer membrane efflux protein {ECO:0000313|EMBL:EIL94713.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane protein rbh
scnpilot_solids2_trim150_scaffold_2118_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3231..4298
DNA (1068bp) protein (356aa)
RND family efflux transporter MFP subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H1_9GAMM
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EIL94712.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RND family efflux transporter, MFP subunit
scnpilot_solids2_trim150_scaffold_2118_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4295..7366
DNA (3072bp) protein (1024aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H0_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIL94711.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cation/multidrug efflux pump rbh
scnpilot_solids2_trim150_scaffold_2118_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7398..8435
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94710.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2118_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8481..9671)
DNA (1191bp) protein (397aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G8_9GAMM
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL94709.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ADP-heptose:LPS heptosyltransferase rbh
scnpilot_solids2_trim150_scaffold_2118_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9881..10189)
DNA (309bp) protein (103aa)
Peptidase propeptide domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFK8_9GAMM
Peptidase propeptide domain-containing protein
Peptidase propeptide domain-containing protein {ECO:0000313|EMBL:AGG88837.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2118_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10567..11262)
DNA (696bp) protein (232aa)
Glycosyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN3_9GAMM
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGG87535.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2118_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11238..11636)
DNA (399bp) protein (133aa)
Glycosyl transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV5_9GAMM
Glycosyl transferase {ECO:0000313|EMBL:EIL97646.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycosyltransferase
scnpilot_solids2_trim150_scaffold_2118_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11633..12004)
DNA (372bp) protein (124aa)
Polysaccharide deacetylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN4_9GAMM
putative xylanase/chitin deacetylase
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:AGG87536.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2118_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12004..12330)
DNA (327bp) protein (109aa)
Polysaccharide deacetylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN4_9GAMM
putative xylanase/chitin deacetylase
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:AGG87536.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2118_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12405..13799)
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G7_9GAMM
signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_2118_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13796..13915)
DNA (120bp) protein (40aa)
Two component transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G6_9GAMM
Two component transcriptional regulator {ECO:0000313|EMBL:EIL94707.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
two component transcriptional regulator
Displaying 15 items

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