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scnpilot_solids2_trim150_scaffold_1953_6

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(4226..4978)

Top 3 Functional Annotations

Value Algorithm Source
Signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR89_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 248.0
  • Bit_score: 287
  • Evalue 1.00e-74
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EIM01414.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 248.0
  • Bit_score: 280
  • Evalue 2.20e-72
putative two-component hybrid sensor and regulator similarity KEGG
DB: KEGG
  • Identity: 30.3
  • Coverage: 244.0
  • Bit_score: 84
  • Evalue 4.00e-14

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGAACGACAAGGATTTCGTCTTGAGCGAGCGCCCGGAATCTTGCAGTTCGTCCCTCCGCCAGGCACCCCGCCCCTATGTTCTGGTCGCCGATGACGACCCCGGCAGTTGCCGCTTCCTCAGCGACGGGCTGCGCTCGCTGGGCGCCACGGTGGAGACCGCCGGCAGCGGCCGGGAAGCGCTGGAGCGCGCCGGTGCGGGCAAGTTCGACCTGTTGCTGCTCGACTGCCGCATGCCCGGCGGCGGCGCCCTGCACGTGCTGGAGCAACTGCGCGCCGATGTCCGCTCCGCCTCCGTCGACAGCACCGCCGTGGCCACCAGCGCGGACATCGCGCCGGCCGACCGCAACGACCTGCTGGCGGCAGGCTTCAGCGACATCCTGCTCAAACCCTGCACCCTGACCGACCTACGCCGCGTGCTGGCGCTGATCCAGGCCGAGTCGTCGTCCGTGCTGGACGATGGCGCGGCGCTCTGCAGCAGCGGCGACGCCACCACGATGCGTGCGTTGCGCCTGTTGCTGCGCGAGGAACTCGCGCTGCTGCAAGGCGAACTGGACCAGCTCAGCGCCGACCGCGTCGCATTCGCCGAACGGCTGCACCGGCTGCGTTCCTCATGCGGATTTTGCGGTGCCACGGCGCTGGCCGAACAGGCGGTGCGACTGCAGCGGCAACTCCTGTCCGACGGCTCCGCGCCCGCCGCCTTGGCCAGCTTCCGCCGCGTGCTGGCCGCGACGCTGCAGGCGCTGGACAGCTAG
PROTEIN sequence
Length: 251
MNDKDFVLSERPESCSSSLRQAPRPYVLVADDDPGSCRFLSDGLRSLGATVETAGSGREALERAGAGKFDLLLLDCRMPGGGALHVLEQLRADVRSASVDSTAVATSADIAPADRNDLLAAGFSDILLKPCTLTDLRRVLALIQAESSSVLDDGAALCSSGDATTMRALRLLLREELALLQGELDQLSADRVAFAERLHRLRSSCGFCGATALAEQAVRLQRQLLSDGSAPAALASFRRVLAATLQALDS*